Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq101 84.2 2e-11
>seq101
Length=835023
Score = 84.2 bits (92), Expect = 2e-11
Identities = 191/287 (67%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201
||||| |||||||| || || || | |||||||| ||||||||||| || |||
Sbjct 111311 ATGTAGGTATCAATGAGCAATGAGTAGGTCTCAGAGTGGATGTTTTCCATCATGATTTGA 111252
Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261
|||||||| ||||||| ||| || | || || || | |||| || ||||
Sbjct 111251 AAACCATAGAAGCATCGAGCCTCAGGGATCTGGACCTCGCCGCTGAATCGCTCAACCAAG 111192
Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321
|||||||| || || |||||| || ||||| || || | |||| |||||| |
Sbjct 111191 TTTTCATTGACGATGCCATCAGAGGCGGCAAAGAAGGCAAGGATGTGAGAGATAAAGAAC 111132
Query 14322 TGCTCTTC---ATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCA 14378
||||| || | | | || ||||| ||| | |||||| || ||||| | |||
Sbjct 111131 TGCTCGTCGGAAGTCAGACGATTGTTCCAGTCGTGTTGATCCTTGGACAGATCAATTTCC 111072
Query 14379 TCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425
|| | ||||| || || | || || || |||||| ||| ||
Sbjct 111071 TCGGCAGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 111025
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479726866642600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |