Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq101 84.2 2e-11 >seq101 Length=835023 Score = 84.2 bits (92), Expect = 2e-11 Identities = 191/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 14142 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14201 ||||| |||||||| || || || | |||||||| ||||||||||| || ||| Sbjct 111311 ATGTAGGTATCAATGAGCAATGAGTAGGTCTCAGAGTGGATGTTTTCCATCATGATTTGA 111252 Query 14202 AAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAA 14261 |||||||| ||||||| ||| || | || || || | |||| || |||| Sbjct 111251 AAACCATAGAAGCATCGAGCCTCAGGGATCTGGACCTCGCCGCTGAATCGCTCAACCAAG 111192 Query 14262 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14321 |||||||| || || |||||| || ||||| || || | |||| |||||| | Sbjct 111191 TTTTCATTGACGATGCCATCAGAGGCGGCAAAGAAGGCAAGGATGTGAGAGATAAAGAAC 111132 Query 14322 TGCTCTTC---ATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCA 14378 ||||| || | | | || ||||| ||| | |||||| || ||||| | ||| Sbjct 111131 TGCTCGTCGGAAGTCAGACGATTGTTCCAGTCGTGTTGATCCTTGGACAGATCAATTTCC 111072 Query 14379 TCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425 || | ||||| || || | || || || |||||| ||| || Sbjct 111071 TCGGCAGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 111025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479726866642600