Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq134 170 3e-37
seq101 134 2e-26
>seq134
Length=152861
Score = 170 bits (188), Expect = 3e-37
Identities = 374/554 (68%), Gaps = 6/554 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||||| | ||| ||| | | || |||||| | | | ||| || || | ||
Sbjct 57027 ACCAACGGCACCTCCAATGGTGTCATTCCTATGCTCCGTGTCTTCAACAACACTG-CTCG 57085
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| ||||||||||| || || || || ||| | ||| | ||| | || || ||
Sbjct 57086 ATACGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATTTACCTTGAGCCCTG 57145
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| ||||||||||| || | || ||||||| ||| ||| ||||| || ||
Sbjct 57146 GCACGCCGACGTTTTTGAATTCTTGGATCTGCGCAAGAACCACGGCAAGGAAGAAGCCCG 57205
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | |||||||| | || || ||| | || ||| ||||||||||||| ||| | |
Sbjct 57206 CGCTCGTGACTTGTTCTTGGCCCTGTGGATCCCCGATCTGTTCATGAAGCGTGTCGAGAA 57265
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| |||||| || ||||||||| | || ||||| || | ||||||| ||
Sbjct 57266 GAACGGCGACTGGACTCTCATGTGCCCCAATGAGTGCCCCGGGCTTGCTGATTGCTACGG 57325
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGA-TACGTGAGACGAG 97164
|| ||||| ||| |||| | || ||||| | ||| | || |||| |
Sbjct 57326 TGATGAGTTCGAGAAGCTGTACGAGAAGTATGAGCAGGCTGGCAAAGGTCGCAAGACCA- 57384
Query 97165 TCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCG 97223
|| | | |||| |||||| | |||||| || ||||||| || || || | ||
Sbjct 57385 -TGAAGGCCCAGAAGCTGTGGTATGCCATCTTGGAGGCTCAGACCGAAACCGGCAACCCT 57443
Query 97224 TACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATC 97283
| ||| ||||||||||| | | || || || |||||||| || ||||||||||
Sbjct 57444 TTCATGCTCTACAAGGACAGCTGCAACCGTAAAAGCAACCAGAAGAACCTGGGCACCATT 57503
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343
| ||||| || ||||| || || | |||||| |||| || ||| || |||
Sbjct 57504 CGCAGTTCCAACCTTTGCACTGAGATCATCGAGTACTGTGCTCCCGATGAGGTCGCTGTT 57563
Query 97344 TGCGTTCTGGCATC 97357
||| ||| |||||
Sbjct 57564 TGCAATCTCGCATC 57577
>seq101
Length=835023
Score = 134 bits (148), Expect = 2e-26
Identities = 211/293 (72%), Gaps = 12/293 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||||||||| ||||| | ||| || | ||||||
Sbjct 111025 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAAATTGATCTG 111084
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAG-AG---TTTAT 125134
|||||||| | |||| ||| | | |||| ||||| | || |||| || |||||
Sbjct 111085 TCCAAGGATCAACACGACTGGAACAATCGTCTGACT---TCCGA-CGAGCAGTTCTTTAT 111140
Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAA-TCTGTTGA 125193
|| ||||| | ||||||||||||| ||| ||||| |||||||| || || | |||||
Sbjct 111141 CTCTCACATCCTTGCCTTCTTTGCCGCCTCTGATGGCATCGTCAATGAAAACTTGGTTGA 111200
Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATC 125252
|||||| ||| | || || |||| ||| ||||| || || || ||||||
Sbjct 111201 -GCGATTCAGCGGCGAGGTCCAGATCCCTGAGG-CTCGATGCTTCTATGGTTTTCAAATC 111258
Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
||||| || ||| | ||||| || | ||||| || ||||| | |||||
Sbjct 111259 ATGATGGAAAACATCCACTCTGAGACCTACTCATTGCTCATTGATACCTACAT 111311
Score = 132 bits (146), Expect = 7e-26
Identities = 335/503 (67%), Gaps = 25/503 (5%)
Strand=Plus/Plus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| || || ||||| | |||| |||||||||||| | ||| | || || || | |||
Sbjct 111421 ATCCGAAAGAAGGCCGATTGGGCTATTCGGTGGATCCAGGACAAGAACTCATCTTTTGCC 111480
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | ||||| || ||||| ||||| ||||| || ||||| ||| ||| ||| ||
Sbjct 111481 CAGCGTCTGGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCAGTGGTGCTTTCGCGTCC 111540
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| |||||||||||||| || |||||||| || |||| | |||||| | ||
Sbjct 111541 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCTTGACATTCTCCAACGAGCTCATT 111600
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGT 125600
||||| || |||||||| ||| ||||| || |||| || | || |||
Sbjct 111601 TCTCGTGATGAGGGCCTGCACACCGACTTCGC-------CTGTCTC-CTACACTCT---- 111648
Query 125601 CCCGAGTGCAGATCC-AGCGATGAA-AAGGTCAT---CAACATTGTAACCGATGCCGTGA 125655
| || ||| || ||| | || || |||| | || | ||||| || || |
Sbjct 111649 --CACTTGAAGAACCGAGCCAGCAAGCAGATCATTCGTGAGATCATCACCGACGCTGTCA 111706
Query 125656 GGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA 125715
|| || || ||||| || ||||| | || || | | | ||||||||||
Sbjct 111707 ACATCGAGCAGGAGTTCCTGACCGAGGCACTGCCTTGCGCTCTTCTGGGCATGAACTCGG 111766
Query 125716 AGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC- 125774
| || ||| | ||||| |||||||| || || ||||| || | | |||||
Sbjct 111767 ACCTCATGAAGCAATACATCGAGTTTGTTGCCGACCGTCTTCT---TGTGGCACTTGGCA 111823
Query 125775 -CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGG 125832
|| ||||||||||| | || ||||| || |||||| | ||| || || | |
Sbjct 111824 ACGAGAAGATTTACAAGTCTGCCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCG 111883
Query 125833 GTAAGACCAACTTTTTCGAGAAG 125855
| ||||||||||| |||||||||
Sbjct 111884 GCAAGACCAACTTCTTCGAGAAG 111906
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057449247640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |