Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq134 322 1e-82
>seq134
Length=152861
Score = 322 bits (356), Expect = 1e-82
Identities = 1054/1623 (65%), Gaps = 20/1623 (1%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
||||| ||||| | ||||| ||| |||||| || || | | | || ||| |||||||
Sbjct 56826 TTCACTCACGCTTCACCAACCCTGTTCAATGCGGGTACCCCTCAGCCTCAGCTGTCTTCC 56885
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666
||||| || | | |||||||| || |||||| ||||||| ||||| || |||| |
Sbjct 56886 TGCTTCCTGGTTGACATGAAGGAAGACAGCATCGACGGTATCTACGACACCCTCAAGACT 56945
Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725
||||| | || ||||||| ||||| || || ||| | | || | ||| | |||||
Sbjct 56946 TGTGCCATGATCTCCAAGATGGCAGGAGGCATCGGTCTCAACG-TGCACCGAATCCGTGC 57004
Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784
|| | | ||||||| ||| || || ||| ||||| | |||| ||||| |
Sbjct 57005 CACCGG-CTCTTACATTGCCGGTACCAACGGCACCTCCAATGGTGTCATTCCTATGCTCC 57063
Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844
|||| || |||| ||||| | |||||||||||||| || ||||| || || |
Sbjct 57064 GTGTCTTCAACAACACTGCTCGATACGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTT 57123
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
| || || || || ||||| || ||||| ||||||| || | || || || || |
Sbjct 57124 TCGCCATTTACCTTGAGCCCTGGCACGCCGACGTTTTTGAATTCTTGGATCTGCGCAAGA 57183
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|| || || || ||| || || ||||| |||||| || || ||| | | || |
Sbjct 57184 ACCACGGCAAGGAAGAAGCCCGCGCTCGTGACTTGTTCTTGGCCCTGTGGATCCCCGATC 57243
Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATG 364022
|| |||||||| || ||| | | | | | ||| | ||| | ||||| | || ||
Sbjct 57244 TGTTCATGAAGCGTGTCGAG--AAGAACGGCGACTGGACTCTCATGTGCCCCAATGAGTG 57301
Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082
|| || ||| | ||| | ||||| || | | || ||||| ||||||||
Sbjct 57302 CCCCGGGCTTGCTGATTGCTACGGTGATGAGTTCGAGAAGCTGTACGAGAAGTATGAGCA 57361
Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142
|| || || | ||| ||||| || || |||||||| |||| ||||||| |||| |
Sbjct 57362 GGCTGGCAAAGGTCGCAAGACCATGAAGGCCCAGAAGCTGTGGTATGCCATCTTGGAGGC 57421
Query 364143 GCAGATTGAGACAGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201
|||| || || || | ||||| | ||| | ||||| || |||||||| || ||
Sbjct 57422 TCAGACCGAAACCGGCA-ACCCTTTCATGCTCTACAAGGACAGCTGCAACCGTAAAAGCA 57480
Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260
||||| || |||| || || |||| |||| |||||| || || ||||| || || |||
Sbjct 57481 ACCAGAAGAACCTGGGCACCATTC-GCAGTTCCAACCTTTGCACTGAGATCATCGAGTAC 57539
Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319
|||||||| ||| || || || || || || || | || || || | |||||
Sbjct 57540 TGTGCTCCCGATGAGGTCGCTGTTTGCAATCTCGCATCATTGGCTCTGCCTTCCTTTGTT 57599
Query 364320 -----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374
|| || || | ||| |||| | || | || || || | ||
Sbjct 57600 GACTACAACGAGGGCTGCTACGACTTCCAGAAGCTACACGAGGTCACACAGGTTGTCGTC 57659
Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCT 364434
|||| | ||||| |||||||| || | || || || || |||
Sbjct 57660 CGCAACTTGAACAAGATTATCGACGTCAACCACTACCCCATCATCGAGGCCCGCAACAGC 57719
Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494
|| |||||||| || || |||||| | ||||| ||||| || ||||| | || ||
Sbjct 57720 AACATGCGTCACCGACCCATTGGTGTCGGTGTCCAGGGTCTTGCTGATGCCTTCCTGGCT 57779
Query 364495 CTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACA 364554
|| ||| | || || || || || ||||||| | || ||| |||||||||| ||
Sbjct 57780 CTTCGCATGCCCTTCGAGTCCCCCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAGACC 57839
Query 364555 ATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTC 364613
|| || || || |||| || ||| ||| | | || || |||| |||||
Sbjct 57840 ATTTACCACGCTGCTTTGACGGCCTCG-GTGCAACTCGCTAAGGAGGAGGGTCCTTACTC 57898
Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673
|| | |||| ||||| || |||| | ||||||||||| | ||||| || |
Sbjct 57899 TAGCTTCAAGGGTTCCCCAGCATCTGAGGGTATCCTCCAGTTTGATATGTGGAACGTGAA 57958
Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCG 364733
||| || | || ||| ||||||| || || || | |||||| |||| |||| |||
Sbjct 57959 GCCCTCCGACCTTTGGGACTGGGAGACCCTTCGCGAGCAGGTTAAGGAGCACGGTATTCG 58018
Query 364734 CAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAA 364793
|||| | | || || || ||||| || || |||| | |||||||| || || ||
Sbjct 58019 CAACAGCTTGCTTCTCGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAATAA 58078
Query 364794 CGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATT 364853
||| |||||||| || | ||| || | || ||||| || ||| | || || ||
Sbjct 58079 CGAATGCTTCGAGCCTTATACCTCGAACATCTACCAGCGCCGTGTCCTTGCTGGTGAGTT 58138
Query 364854 TCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAG 364913
| ||| ||||| | || | ||||| || || || ||||| ||
Sbjct 58139 CCAGGTTGTTAACCCCTGGCTCTTGAAGGACCTGGTAGATATGGGCTTGTGGTCGGATGC 58198
Query 364914 CATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA 364973
|||||||||| ||||| | | || |||||| | |||||||| || |||| ||
Sbjct 58199 CATGAAGAACCGCATCATTTCTGAGAACGGTTCTATCCAGAACATCCCTAACATTCCGGA 58258
Query 364974 AGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATAT 365033
|| | ||| | | ||||| || || ||||| |||||| || || | | ||
Sbjct 58259 CGACATTAAGTCGCTCTACAAGACGGTGTGGGAGATTTCCCAACGCCAGGTCCTCCAAAT 58318
Query 365034 GGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCA 365093
| | |||||||| ||||| || ||| |||| ||||| | ||| | ||||| |
Sbjct 58319 GTCCGCCGATCGTGGTGCCTTCATCGATCAGTCTCAGTCCCTCAACATCCACATGAAAGA 58378
Query 365094 GCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGAC 365153
|| || | |||| | || |||||| ||| || ||||| |||||| |||||
Sbjct 58379 CCCCACAATGGGCAAGATCACCAGCATGCACTTCGCAGGCTGGAAGCTCGGTCTCAAGAC 58438
Query 365154 AGG 365156
||
Sbjct 58439 CGG 58441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303350443847798
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