Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq134 322 1e-82 >seq134 Length=152861 Score = 322 bits (356), Expect = 1e-82 Identities = 1054/1623 (65%), Gaps = 20/1623 (1%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| ||||| | ||||| ||| |||||| || || | | | || ||| ||||||| Sbjct 56826 TTCACTCACGCTTCACCAACCCTGTTCAATGCGGGTACCCCTCAGCCTCAGCTGTCTTCC 56885 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || |||||| ||||||| ||||| || |||| | Sbjct 56886 TGCTTCCTGGTTGACATGAAGGAAGACAGCATCGACGGTATCTACGACACCCTCAAGACT 56945 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||||| ||||| || || ||| | | || | ||| | ||||| Sbjct 56946 TGTGCCATGATCTCCAAGATGGCAGGAGGCATCGGTCTCAACG-TGCACCGAATCCGTGC 57004 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | | ||||||| ||| || || ||| ||||| | |||| ||||| | Sbjct 57005 CACCGG-CTCTTACATTGCCGGTACCAACGGCACCTCCAATGGTGTCATTCCTATGCTCC 57063 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 |||| || |||| ||||| | |||||||||||||| || ||||| || || | Sbjct 57064 GTGTCTTCAACAACACTGCTCGATACGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTT 57123 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 | || || || || ||||| || ||||| ||||||| || | || || || || | Sbjct 57124 TCGCCATTTACCTTGAGCCCTGGCACGCCGACGTTTTTGAATTCTTGGATCTGCGCAAGA 57183 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || || ||| || || ||||| |||||| || || ||| | | || | Sbjct 57184 ACCACGGCAAGGAAGAAGCCCGCGCTCGTGACTTGTTCTTGGCCCTGTGGATCCCCGATC 57243 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| || ||| | | | | | ||| | ||| | ||||| | || || Sbjct 57244 TGTTCATGAAGCGTGTCGAG--AAGAACGGCGACTGGACTCTCATGTGCCCCAATGAGTG 57301 Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082 || || ||| | ||| | ||||| || | | || ||||| |||||||| Sbjct 57302 CCCCGGGCTTGCTGATTGCTACGGTGATGAGTTCGAGAAGCTGTACGAGAAGTATGAGCA 57361 Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 || || || | ||| ||||| || || |||||||| |||| ||||||| |||| | Sbjct 57362 GGCTGGCAAAGGTCGCAAGACCATGAAGGCCCAGAAGCTGTGGTATGCCATCTTGGAGGC 57421 Query 364143 GCAGATTGAGACAGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 |||| || || || | ||||| | ||| | ||||| || |||||||| || || Sbjct 57422 TCAGACCGAAACCGGCA-ACCCTTTCATGCTCTACAAGGACAGCTGCAACCGTAAAAGCA 57480 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATAC 364260 ||||| || |||| || || |||| |||| |||||| || || ||||| || || ||| Sbjct 57481 ACCAGAAGAACCTGGGCACCATTC-GCAGTTCCAACCTTTGCACTGAGATCATCGAGTAC 57539 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319 |||||||| ||| || || || || || || || | || || || | ||||| Sbjct 57540 TGTGCTCCCGATGAGGTCGCTGTTTGCAATCTCGCATCATTGGCTCTGCCTTCCTTTGTT 57599 Query 364320 -----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374 || || || | ||| |||| | || | || || || | || Sbjct 57600 GACTACAACGAGGGCTGCTACGACTTCCAGAAGCTACACGAGGTCACACAGGTTGTCGTC 57659 Query 364375 TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCT 364434 |||| | ||||| |||||||| || | || || || || ||| Sbjct 57660 CGCAACTTGAACAAGATTATCGACGTCAACCACTACCCCATCATCGAGGCCCGCAACAGC 57719 Query 364435 AATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATG 364494 || |||||||| || || |||||| | ||||| ||||| || ||||| | || || Sbjct 57720 AACATGCGTCACCGACCCATTGGTGTCGGTGTCCAGGGTCTTGCTGATGCCTTCCTGGCT 57779 Query 364495 CTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACA 364554 || ||| | || || || || || ||||||| | || ||| |||||||||| || Sbjct 57780 CTTCGCATGCCCTTCGAGTCCCCCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAGACC 57839 Query 364555 ATGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTC 364613 || || || || |||| || ||| ||| | | || || |||| ||||| Sbjct 57840 ATTTACCACGCTGCTTTGACGGCCTCG-GTGCAACTCGCTAAGGAGGAGGGTCCTTACTC 57898 Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673 || | |||| ||||| || |||| | ||||||||||| | ||||| || | Sbjct 57899 TAGCTTCAAGGGTTCCCCAGCATCTGAGGGTATCCTCCAGTTTGATATGTGGAACGTGAA 57958 Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCG 364733 ||| || | || ||| ||||||| || || || | |||||| |||| |||| ||| Sbjct 57959 GCCCTCCGACCTTTGGGACTGGGAGACCCTTCGCGAGCAGGTTAAGGAGCACGGTATTCG 58018 Query 364734 CAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAA 364793 |||| | | || || || ||||| || || |||| | |||||||| || || || Sbjct 58019 CAACAGCTTGCTTCTCGCCCCTATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAATAA 58078 Query 364794 CGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATT 364853 ||| |||||||| || | ||| || | || ||||| || ||| | || || || Sbjct 58079 CGAATGCTTCGAGCCTTATACCTCGAACATCTACCAGCGCCGTGTCCTTGCTGGTGAGTT 58138 Query 364854 TCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAG 364913 | ||| ||||| | || | ||||| || || || ||||| || Sbjct 58139 CCAGGTTGTTAACCCCTGGCTCTTGAAGGACCTGGTAGATATGGGCTTGTGGTCGGATGC 58198 Query 364914 CATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGA 364973 |||||||||| ||||| | | || |||||| | |||||||| || |||| || Sbjct 58199 CATGAAGAACCGCATCATTTCTGAGAACGGTTCTATCCAGAACATCCCTAACATTCCGGA 58258 Query 364974 AGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATAT 365033 || | ||| | | ||||| || || ||||| |||||| || || | | || Sbjct 58259 CGACATTAAGTCGCTCTACAAGACGGTGTGGGAGATTTCCCAACGCCAGGTCCTCCAAAT 58318 Query 365034 GGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCA 365093 | | |||||||| ||||| || ||| |||| ||||| | ||| | ||||| | Sbjct 58319 GTCCGCCGATCGTGGTGCCTTCATCGATCAGTCTCAGTCCCTCAACATCCACATGAAAGA 58378 Query 365094 GCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGAC 365153 || || | |||| | || |||||| ||| || ||||| |||||| ||||| Sbjct 58379 CCCCACAATGGGCAAGATCACCAGCATGCACTTCGCAGGCTGGAAGCTCGGTCTCAAGAC 58438 Query 365154 AGG 365156 || Sbjct 58439 CGG 58441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350443847798