Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq134 156 5e-33 seq101 95.1 2e-14 >seq134 Length=152861 Score = 156 bits (172), Expect = 5e-33 Identities = 438/665 (66%), Gaps = 18/665 (3%) Strand=Plus/Minus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || || || || |||| || ||||| | | ||| || |||| | || || || ||| Sbjct 57310 AGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTC 57251 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || || ||||| || ||||| || || | || | || | | | ||| || || Sbjct 57250 ATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTG 57191 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| ||||| | ||| | | || || | ||||| || || | ||| Sbjct 57190 CCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAA 57131 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | | || || || ||||| || ||||| || | ||||| ||| ||||| || Sbjct 57130 ATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTG 57071 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || | | ||| ||||| | ||||||||| || || ||||| || | || || Sbjct 57070 AAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAG 57011 Query 63320 CCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 || ||||||| || | | |||| |||| || || |||||||| || ||||| | Sbjct 57010 CCGGTGGCACGGATTCGGTGCACGTTGA--GACCGATGCCTCCTGCCATCTTGGAGATCA 56953 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | || || ||||| || || || || || ||| |||||| || | Sbjct 56952 TGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCA 56893 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || ||| ||||| || | || || |||||||| || | ||| || ||||||| Sbjct 56892 GGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGT 56833 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC----AATAGCT-GA-GTCTATAT 63551 |||| ||| || || | || ||||| ||||| | ||| || ||| | Sbjct 56832 GAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCAC 56773 Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611 |||| |||| || || ||||||||||| | |||||||||||||| ||||| |||| Sbjct 56772 CCCA--GATG----CCGACAGCGACACGCATGATCATGTGCTGAGGTCGCTCAACAATCT 56719 Query 63612 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 63669 || | || |||| | ||||||| || | ||| || || || || || | ||| Sbjct 56718 TGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTGAAGCCGAAGTATTGGTAGT 56659 Query 63670 TGAAA 63674 ||||| Sbjct 56658 TGAAA 56654 >seq101 Length=835023 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| ||||| ||| ||| || ||||| || | | ||| | |||||||| || || | Sbjct 111636 ACAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAA 111577 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| || |||||||| || ||||| || |||||||| || | ||| ||||| Sbjct 111576 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAA 111517 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATG 32836 ||| || || || || || || |||| || | || || || | | | ||| || Sbjct 111516 AATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 111457 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTT 32867 |||||| ||||||||||||||||||| Sbjct 111456 GATCCACCGAATAGCCCAATCGGCCTTCTTT 111426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630503044400