Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq13 104 5e-17
seq101 102 2e-16
seq24 95.1 2e-14
>seq13
Length=1168504
Score = 104 bits (114), Expect = 5e-17
Identities = 169/241 (70%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 279327 GAGAAGGAGACTGAGCCAGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGT 279386
||| |||| |||| |||||||| || || ||||| |||||| ||||| || |||
Sbjct 900188 GAGGAGGACGATGAGGAGGGTGAGGACCTTTGCAACTGTACTTTCTCCCTCGCCTACGGT 900129
Query 279387 GGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTC 279446
| |||||||| || ||| |||| ||| | ||||||||||| | || || |||||
Sbjct 900128 GCCAAGATTCTCCTCAACCAGACCCATCTCCGCCTCAAGCGTGGCCAGCGTTACGGTCTT 900069
Query 279447 ATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTG 279506
||| ||||| || | || ||| || || ||||| ||||| |||| ||| |
Sbjct 900068 TGCGGCCCCAACGGTTCTGGCAAGTCAACCCTCATGCGTGCCATCAACAACGAGCAGGTC 900009
Query 279507 GAAGGATTTCCTAACGCA-TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|| || || ||||| ||| ||||| | ||| || | || ||||||||| | |||||
Sbjct 900008 GAGGGTTTCCCTAA-GCAGAGCGAGGTCAAGACTGTCTTCGTCGAGCACGACCTGGACTC 899950
Query 279566 C 279566
|
Sbjct 899949 C 899949
>seq101
Length=835023
Score = 102 bits (112), Expect = 2e-16
Identities = 299/452 (66%), Gaps = 18/452 (4%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| | || ||||| ||||||||||||||||||||| |
Sbjct 111902 TCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGCA 111843
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATG-CGGTCTGCCACAAACTCCAG 251681
| ||||| ||| | ||||||||| || |||| | ||||| || |||||||| |
Sbjct 111842 GACTTGTAAATCTTCTCGTTGCCAAGTGCCAC-AAGAAGACGGTCGGCAACAAACTCGAT 111784
Query 251682 ATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGAT 251741
|| || ||| || || ||||||||||| | | | ||||| | |||||| |
Sbjct 111783 GTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAGCGCAAGGCAGTGCCTCGGTCAG 111724
Query 251742 GAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTG-CCAG--AGA 251798
||| |||| ||| || || || || | || |||| || | | |
Sbjct 111723 GAACTCCTGCTCGATGTTGACAGCGTCGGTGA----TGATCTCACGAATGATCTGCTTGC 111668
Query 251799 CAGCT-TGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857
||| ||||| || | |||| ||||| | | || | |||||| ||||| |
Sbjct 111667 TGGCTCGGTTCTTCAAGTGAGAGTGTAGGAGACAGGCGAAGTCGGTGTGCAGGCCCTCAT 111608
Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917
| ||| |||| ||||||||| | || ||||||||| | ||||| ||| ||||||
Sbjct 111607 CACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCAGGCATGAGACCACGCTTCTTGAGCC 111548
Query 251918 AGAAGATTG-CGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACA 251976
||||||| | ||| |||| | ||| ||| | | |||||| || | | |||||
Sbjct 111547 AGAAGATGGACGCGAAAGCA-CCACTGAAGAAAATACCCTCAACGGCAGCGAAAGCAACC 111489
Query 251977 AGGCGCTCAGCAAACGA------CTTGTCCTG 252002
|| |||| ||||| || |||||||||
Sbjct 111488 AGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 111457
>seq24
Length=1044019
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || || |||||||||||||||||||||||||| || ||| | || ||||| || | |
Sbjct 822460 GTTGGCTCCCTGTCGGGTGGTTGGAAGATGAAGCTTGCTCTCGCCCGAGCCATGCTCCAG 822401
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
|| || || || || || || || || || || ||||| | || ||||||| | |||
Sbjct 822400 CGCGCTGACGTTCTCCTCCTGGACGAACCTACTAACCATCTTGATGTCACCAACATCGCC 822341
Query 279816 TGGCTAGTGTCCTACCT 279832
||||| | |||||||
Sbjct 822340 TGGCTGGAAACCTACCT 822324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834311028949
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |