Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq134 329 6e-85
seq101 205 2e-47
>seq134
Length=152861
Score = 329 bits (364), Expect = 6e-85
Identities = 1109/1706 (65%), Gaps = 83/1706 (5%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||||| ||| || |||| ||| |||| | ||||||||||||||||||||||| |
Sbjct 58488 TGAACTGGATGGGAGCAGCGGCAGCCGTGGTGCGGAGGTAGTACATGCCGGTCTTGAGAC 58429
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
| |||| | || ||||||| || | ||| ||| || ||||| |
Sbjct 58428 CGAGCTTCCAGCCTGCGAAGTGCATGCTGGTGATCTTGCCCATTGTG------GGGTCTT 58375
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
| | || |||||||||||| ||| |||| ||||| | || || ||||
Sbjct 58374 TCATGTG------GATGTTGAGGGACTGAGACTGATCGATGAAGGCACCACGATCGGCGG 58321
Query 243921 CCATGGTGATGAGGTCCTTC---TGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGA 243977
||| || |||| ||| || || ||||| || |||||||||||| | ||| |
Sbjct 58320 ACATT-TG--GAGGACCTGGCGTTGGGAAATCTCCCACACCGTCTTGTAGAGCGACTTAA 58264
Query 243978 GGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037
|| || || | ||||||||| | || || || | |||| || |
Sbjct 58263 TGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAGAAATGATGCGGTTCT 58204
Query 244038 GCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCA 244094
|||| ||| ||||| ||||| |||| ||| || | ||| | || |
Sbjct 58203 TCATGGCATCCGACCACAAGCCCATATCTACCAGGTCCTT---CAAGAGCCAGGGGTTAA 58147
Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154
| ||||| ||||| || | || || ||||||||||||| ||| | | |||||||
Sbjct 58146 CAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTATAAGGCTCGA 58087
Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCAT--GGGCGACACCAG 244212
|| || | |||||||| ||||||| || || ||||| ||||| |||||| | ||
Sbjct 58086 AGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGA--AG 58029
Query 244213 CAGACTGTTCCTCACGCCGTGC--CT----CTGGATGCGGAGTCTGAGCTCGTTCCAGTC 244266
|| ||||| | | |||||| || ||| ||| || | ||| ||||||
Sbjct 58028 CAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGT---CTC---CCAGTC 57975
Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326
||| | | | ||| | | || |||| |||||| |||||||| || | ||||
Sbjct 57974 CCAAAGGTCGGAGGGCT--TCACGTT-------CCACATATCAAACTGGAGGATACCCTC 57924
Query 244327 -GCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAG 244384
| || |||| |||| | || | | ||| ||||| || || || || | || |
Sbjct 57923 AGATGCTGGGGAA-CCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTGCACCG 57865
Query 244385 CTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCC 244444
|||| | | | |||| ||| |||||||| |||||| |||||||| || || |||
Sbjct 57864 AGGCCGTCAAAG-CAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCC 57806
Query 244445 TTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504
| | | | |||||| |||| | || |||| | || || || ||||| || |||
Sbjct 57805 TCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCG 57746
Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564
| || ||||||| ||| ||| ||||| | ||| ||| | |||||| ||||
Sbjct 57745 ACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGCCTCGATGATGGGGTAGTGGTTG 57686
Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGA 244624
||||||| | |||||| | ||||||| || | | ||| ||| ||| |||
Sbjct 57685 ACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTCTGG 57626
Query 244625 AAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684
|||||||| | || ||||| | | || | ||||| || || |
Sbjct 57625 AAGTCGTA---GCAGC---CCTCGTTG-TAGTCA-----ACAAAGGAAGGCAGAGCCAAT 57578
Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744
|| || ||||| || || ||||| || | ||||| || ||||| |||||
Sbjct 57577 GATGCGAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAA 57518
Query 244745 AGGTT---ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCG 244801
||||| ||||| ||||||||||||| || || ||| || ||||||| |
Sbjct 57517 AGGTTGGAACTGCGA---ATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTG 57461
Query 244802 TCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAG 244861
||||||||||||||||| || ||||| ||| ||| || | | || | | |||
Sbjct 57460 TCCTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCAC 57401
Query 244862 AGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGG 244921
|| | | ||||| | ||| ||||| | ||||| | ||| || ||||||
Sbjct 57400 AGCTTCTGGGCCTTCATGGTCTTGCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAGC 57341
Query 244922 GCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGA 244981
||||||||| || || || | || ||||||||| ||||||||||||
Sbjct 57340 TTCTCGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGA 57281
Query 244982 CTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGG 245041
|||| |||||| | || ||| | || |||||| || ||||||||||| |||||| |
Sbjct 57280 GTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAG 57221
Query 245042 AAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101
|| | ||| | | | || ||| ||| |||||| | ||| ||||| || |||
Sbjct 57220 AACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCA 57161
Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161
|| |||||| ||||||||||||| | ||| | |||| || ||||| |||||||||||
Sbjct 57160 AAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCG 57101
Query 245162 CCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCC 245217
|||||||| | | | |||||| |||||||| || || |||| | | ||
Sbjct 57100 CCCTGGTCGA----CGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACC 57045
Query 245218 GTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA--GGTTGCTGATG 245275
|| ||| ||||||||| || ||||| | ||| || | | || | ||| |
Sbjct 57044 ATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTT 56985
Query 245276 GACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCT 245335
|| | || | || || || ||||||||| | ||| || |||||| ||||||
Sbjct 56984 GAGA--CCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAG 56927
Query 245336 ATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG 245395
|| || || |||||||| |||||||| | ||| |||||||| |||||||| ||||
Sbjct 56926 ATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGA 56867
Query 245396 GGGCTGCACGAGTTGAACAGAGTGGG 245421
||| | | || |||||||| || ||
Sbjct 56866 GGGGTACCCGCATTGAACAGGGTTGG 56841
>seq101
Length=835023
Score = 205 bits (226), Expect = 2e-47
Identities = 597/913 (65%), Gaps = 80/913 (9%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || |||| |||||| |||||||| ||||| |||
Sbjct 111025 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAAATTGATCTG 111084
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACT-GTCTGAGA----ACGAAAAGTTTTTCCTCA 42414
||||||| || |||| | || | |||||| |||| |||| || ||
Sbjct 111085 TCCAAGGATCAACACGACTGGAA--CAATCGTCTGACTTCCGACGAGCAGTTCTTTATCT 111142
Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474
|||| || |||||||| ||||||||||| ||||| |||||||| ||| |||
Sbjct 111143 CTCACATCCTTGCCTTCTTTGCCGCCTCTGATGGCATCGTCAATGAAAACTTGGTTGAGC 111202
Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534
| |||| ||||| ||| | |||||| || |||||||| || || || || |
Sbjct 111203 GATTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTATGGTTTTCAAATCATGA 111262
Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591
| || ||| | ||||||||| ||| | | |||||| | || |||||| ||| |
Sbjct 111263 TGGAAAACATCCACTCTGAGACCTACTC---ATTGCTCATTGATACCTACATCAAGGAGC 111319
Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA-----TGCCC----------- 42635
| | | | || | || ||||| ||||| ||||| | | |||
Sbjct 111320 CTGCCCAACGCACTTACCTCTTCAATGCCATTGAGACCAGTATGTCCCCCACCATGTCTC 111379
Query 42636 ---------TGCAT-CAAG----------------------------AAGAAGGCGGACT 42657
||||| |||| |||||||| || |
Sbjct 111380 AGCTCCACGTGCATACAAGCTAACCAGCTCCAGTTCCTTGCATCCGAAAGAAGGCCGATT 111439
Query 42658 GGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716
|||| | |||||| || | | || | || | || | | || | ||||| || ||
Sbjct 111440 GGGCTATTCGGTGGATCCAG-GACAAGAACTCATCTTTTGCCCAGCGTCTGGTTGCTTTC 111498
Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776
| ||||| ||||| || |||||| || || ||||| |||||||||||||||||| ||
Sbjct 111499 GCTGCCGTTGAGGGTATTTTCTTCAGTGGTGCTTTCGCGTCCATCTTCTGGCTCAAGAAG 111558
Query 42777 AA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835
||| || ||||| || | || ||||| ||||| ||||| | || ||||| ||
Sbjct 111559 CGTGGTCTC-ATGCCTGGCTTGACATTCTCCAACGAGCTCATTTCTCGTGATGAGGGCCT 111617
Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA-AGCCCTCGAAGG 42894
||| | ||||| ||||| ||||| ||| ||| | | | || |||| | |||
Sbjct 111618 GCACACCGACTTCGCCTGTCTCCTACACTCT---CACTTGAAGAACCGAGCCAGC-AAGC 111673
Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT 42954
|| | || | |||||||| || || || | |||||| |||||||||| || ||
Sbjct 111674 AGATCATTCGTGAGATCATCACCGACGCTGTCAACATCGAGCAGGAGTTCCTGACCGAGG 111733
Query 42955 CGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGT-GCAAGTACATCCAGTAC 43013
| ||||| | || | ||||||||| ||||||||| |||| |||||| |||
Sbjct 111734 CACTGCCTTGCGCTCTTCTGGGCATGAACTCGGACCTCATGAAGCAA-TACATCGAGTTT 111792
Query 43014 GTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCC 43072
|| ||||||| ||| || ||| || ||| || | | ||||| | | |||
Sbjct 111793 GTTGCCGACCGTCTTCTTGTGGCACTTGGCAACGAGAAGATT-TACAAGTCTGCCAACCC 111851
Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 43132
||||||||| |||||||||||||| | | |||||||||||||| ||||||||||| ||
Sbjct 111852 CTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGT 111911
Query 43133 CGCCGACTACCAG 43145
| || ||||||
Sbjct 111912 TGGTGATTACCAG 111924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944336968998640
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