Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 1e-20
>seq1
Length=5508434
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
|||||| || | | || || || |||| ||||| || || ||||||||||||||
Sbjct 3986523 ACCGCCACGGAGACGGAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCACT 3986582
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || || |||||||| || ||| |||| || ||||||||||| || ||
Sbjct 3986583 CAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAATAAGTCGCTGCTGGTCTGGGGG 3986642
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || ||||| || || ||| ||| || | |||||| | || ||
Sbjct 3986643 GATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATAGTATCAGAAGATTCGAC 3986702
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | ||||||||||| | || || |||||||| |||||
Sbjct 3986703 CTCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3986750
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | || || || || |||| || || || || || |||||||| || |
Sbjct 3986751 ACCACCACGAAGTCGGAGAACAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGA 3986810
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| || | || ||||||||||| ||||| | ||||| ||||||||||| || ||
Sbjct 3986811 CAAGGTACGGCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGGTCTGGGGG 3986870
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | || || | |||||
Sbjct 3986871 GATACCCTCCTTATCCTGAATCTTCGACTTGACATTGTCGATCGTGTCGGATGACTCCAC 3986930
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | ||||| |||||||| || || || || ||||||||
Sbjct 3986931 CTCAAGGGTGATAGTCTTACCGGTCAAGGTCTTGACAAAGATTTGCAT 3986978
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | || || || |||| || ||||| ||||| |||||||| || |
Sbjct 3986979 ACCACCGCGAAGACGGAGGACGAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGA 3987038
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||| || | || |||||||||||||| ||| | || || ||||| |||||||| ||
Sbjct 3987039 GAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGGGG 3987098
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| ||| || | ||||| | || ||
Sbjct 3987099 GATACCCTCCTTGTCCTGGATCTTCGACTTCACATTGTCGATGGTATCCGAAGACTCGAC 3987158
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433
|| | || | ||||||||| || | || || ||||
Sbjct 3987159 CTCGAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGA 3987196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499643619589160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |