Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq134 271 8e-68 >seq134 Length=152861 Score = 271 bits (300), Expect = 8e-68 Identities = 454/654 (69%), Gaps = 2/654 (0%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||||| ||| || |||||||| ||||| |||||| Sbjct 56658 AACTACCAATACTTCGGCTTCAAGACTCTAGAGCGATCCTACCTCCTGAAGATCGATGGC 56717 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || |||||||| || || || | ||||| ||||| |||| || || || Sbjct 56718 AAGATTGTTGAGCGACCTCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGTGAC 56777 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| | ||| || | | | || |||| |||| || || || Sbjct 56778 GACATCGAGCGTGTCCTGGAGACCTACAACCTCATGTCCAGCAAGCTGTTCACTCACGCT 56837 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GAT 93953 | || ||||||||||| ||||| ||||| ||| ||| ||||||| || ||||| | | Sbjct 56838 TCACCAACCCTGTTCAATGCGGGTACCCCTCAGCCTCAGCTGTCTTCCTGCTTCCTGGTT 56897 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| |||| ||| || | ||||| ||||||| ||||| | || Sbjct 56898 GAC-ATGAAGGAAGACAGCATCGACGGTATCTACGACACCCTCAAGACTTGTGCCATGAT 56956 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || || || || ||||| ||| || ||| | ||||||| || || || Sbjct 56957 CTCCAAGATGGCAGGAGGCATCGGTCTCAACGTGCACCGAATCCGTGCCACCGGCTCTTA 57016 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| ||||||||| ||||||||||| || || | ||||||||||| ||||||||||| Sbjct 57017 CATTGCCGGTACCAACGGCACCTCCAATGGTGTCATTCCTATGCTCCGTGTCTTCAACAA 57076 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || || ||||| |||||||| || | | | ||| ||||||| | || || Sbjct 57077 CACTGCTCGATACGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATTTACCT 57136 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||||||||||||| ||||| | ||| | || ||||| |||||||||||||| || Sbjct 57137 TGAGCCCTGGCACGCCGACGTTTTTGAATTCTTGGATCTGCGCAAGAACCACGGCAAGGA 57196 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 | | || | ||| | |||| || || ||| | || || || || ||||| || Sbjct 57197 AGAAGCCCGCGCTCGTGACTTGTTCTTGGCCCTGTGGATCCCCGATCTGTTCATGAAGCG 57256 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367 |||||||| ||| || ||||| ||| | || |||||||| || ||||| || Sbjct 57257 TGTCGAGAAGAACGGCGACTGGACTCTCATGTGCCCCAATGAGTGCCCCGGGCT 57310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722031216440