Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq134 215 6e-51
seq101 89.7 6e-13
>seq134
Length=152861
Score = 215 bits (238), Expect = 6e-51
Identities = 1137/1789 (64%), Gaps = 61/1789 (3%)
Strand=Plus/Minus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|||||||||||||| || |||||||| || |||||||| | | ||||| ||
Sbjct 58456 CGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTG 58397
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| |||| | ||| || || |||| || ||| | || || ||||||||||||
Sbjct 58396 ATCTTGCCCATTGTGGGGTCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAG 58337
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTC 115735
|| ||||| || | ||| | | || | | | || | |||||||| ||
Sbjct 58336 GCACCACGATCGGCGGACATTTGGAGGACCTGG--CGTTGGGAAATCTCCCACACCGTCT 58279
Query 115736 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCT 115795
||||||| |||||| || || || || | ||| || |||||||| || |
Sbjct 58278 TGTAGAGCGACTTAATGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAG 58219
Query 115796 TGACCATGAGATCCTTCATATCCTTTGACCAGA-GACCA-ATCTTCTTGAGATCCTCCAC 115853
| ||| | | |||||| | | ||||| | | ||| |||| | || |||| ||
Sbjct 58218 AAATGATGCGGTTCTTCATGGCATCCGACCACAAGCCCATATCTACC--AGGTCCTTCAA 58161
Query 115854 GAG---GTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910
||| | | ||| ||||| |||||||| || ||| || | | | ||||||||
Sbjct 58160 GAGCCAGGGGTTA---ACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTT 58104
Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970
| || || ||||| ||||| || || || |||| ||| || | || ||| || ||
Sbjct 58103 CGAGGTATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGG 58044
Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030
||| || || | || | ||||||||| | ||| | || ||| | || ||||
Sbjct 58043 CATAGGGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGT 57984
Query 116031 GTCCCAGTCGTA---GTTG-AGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATAC 116086
|||||||| | || | || | || | | | |||||||||||||||||||||||
Sbjct 57983 CTCCCAGTCCCAAAGGTCGGAG----GGCTTCACGTTCCACATATCAAACTGGAGGATAC 57928
Query 116087 CTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT--- 116143
| | || ||||| || |||| || | || || ||||| ||| || | ||
Sbjct 57927 CCTCAGATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTGCA 57868
Query 116144 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCT 116203
| ||| || | | || ||||| || || |||||||| || | |||| |
Sbjct 57867 CCGAGGCCGTC---AAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCAC 57811
Query 116204 TGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGA 116263
|||||| ||| || || | | || | || |||| || ||||| ||||
Sbjct 57810 GAGCCTCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGA 57751
Query 116264 CACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG---GGAT 116320
|||||| ||||| || || || | ||| || || || || ||| | | || |
Sbjct 57750 CACCGACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGC---CTCGATGATGGGGT 57694
Query 116321 AAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAA 116380
| || ||||||| | | || | || | |||||||| ||||| || || |
Sbjct 57693 AGTGGTTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTA 57634
Query 116381 GCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATT 116436
|||| | | | || | | || ||| | | | || || ||||||| || | |
Sbjct 57633 GCTTCTGGAAGTCGTAGCAGCC---CTCGTTGTAGTCA-ACAAAGGAAGGCAGAGCCAAT 57578
Query 116437 GACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACAC 116496
|| || ||||| || |||| | |||||| | || |||||| || || || || ||
Sbjct 57577 GATGCGAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAA 57518
Query 116497 AAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCC 116556
| || ||||| ||||||||||| |||||| || || || ||| || |||
Sbjct 57517 AGGTTGGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCC 57458
Query 116557 TTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-C 116615
||||||||||| | || | || || || || || | || | || || | ||| | |
Sbjct 57457 TTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGC 57398
Query 116616 ATCGGCGGCTGGCACAGTGGCGTTGG---CTCGCCCCTCCTCCTCGTACTTTGTGTAGAG 116672
|| | | || || ||| ||| || || ||| ||| ||||| ||| ||
Sbjct 57397 TTCTGGGCCTT---CA-TGGTCTTGCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAG 57342
Query 116673 GGCCTCAAACTCTTCACCCACAGCC-TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGA 116731
||| ||||| ||||| ||| || | ||||| || || || || || | ||
Sbjct 57341 CTTCTCGAACTCATCACCGT-AGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGA 57283
Query 116732 GAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 116791
||| ||| | || || ||| || ||||||||||| || || |||||||| || |||
Sbjct 57282 GAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCA 57223
Query 116792 AGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851
|||| | || ||| ||| |||||||| | || || || |||| ||||| || |
Sbjct 57222 AGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATT 57163
Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC--TTGC--GACGA 116907
| | | || |||||||| || || ||||| | |||| | || | || | |
Sbjct 57162 CAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTG- 57104
Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967
|| |||||| || || | || || ||| || || || ||||| ||||||| ||||
Sbjct 57103 CCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCA 57044
Query 116968 TCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGC 117027
| || ||| || || || ||| ||| | |||| | || ||| | ||
Sbjct 57043 TTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTG 56984
Query 117028 ATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATC 117087
| ||| || || |||||| ||| ||||| || || | |||| || |||||||
Sbjct 56983 AGACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATA 56924
Query 117088 CCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGT 117147
|| ||||| ||| |||| | | | ||||||||| |||| || ||| ||
Sbjct 56923 CCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGG 56864
Query 117148 GTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTAT 117205
||||| || ||||| |||||||||| ||||| |||||| |||| |||||| |
Sbjct 56863 GTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAG--CTTGCTGGACATGAGGT 56806
Query 117206 CGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAA 117265
||||||||||| |||| ||||| || || || |||| | ||| ||||| |
Sbjct 56805 TGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGCATGA 56746
Query 117266 ACATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 117314
||||| || ||| || | | | ||||||| | || |||||||
Sbjct 56745 TCATGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTA 56697
>seq101
Length=835023
Score = 89.7 bits (98), Expect = 6e-13
Identities = 112/151 (74%), Gaps = 2/151 (1%)
Strand=Plus/Minus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
||| || ||||| ||||| || ||||| || || ||||| || || |||||||||||
Sbjct 111621 GTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCAGGCATGAGACC 111562
Query 127591 CCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGATCCCCTCCACAC 127649
|||||||| | |||||| || | | | ||| | ||| |||||| || ||||| ||
Sbjct 111561 ACGCTTCTTGAGCCAGAAGATGGACGCGAAA-GCACCACTGAAGAAAATACCCTCAACGG 111503
Query 127650 ACGCGAACGCAAATAGACGCTCGGCAAAGGA 127680
||||| |||| ||||||| |||||| ||
Sbjct 111502 CAGCGAAAGCAACCAGACGCTGGGCAAAAGA 111472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613505750589240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |