Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq134 104 4e-17 >seq134 Length=152861 Score = 104 bits (114), Expect = 4e-17 Identities = 446/684 (65%), Gaps = 26/684 (4%) Strand=Plus/Minus Query 203843 TCCACCGTGAACTGAATGGCGTTCA-CGGCAGGCCTGCTTCTCAGATAGTACATGCCGGT 203901 || || |||||||| |||| | || |||||| | || | | || |||||||||||||| Sbjct 58495 TCAACAGTGAACTGGATGG-GAGCAGCGGCAGCCGTGGTGCGGAGGTAGTACATGCCGGT 58437 Query 203902 CTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTC 203961 ||| || || || ||| || | ||||||| | | |||| || ||||||| Sbjct 58436 CTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTGATCTTGCCCATTGTGGGGTC 58377 Query 203962 GGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCA 204020 |||||| ||||| || ||||| || |||||| ||||| || ||||| |||| || Sbjct 58376 TTTCATGTGGATGTTGAGGGACTGAGACTGATCGATG-AAGGCACCACGATCGGCGGACA 58318 Query 204021 TATTGATAA--TGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGTGT 204077 | | || | ||| | || ||||||||||||||||||||| | | || || | ||| Sbjct 58317 TTTGGAGGACCTGGCGT--TGGGAAATCTCCCACACCGTCTTGTAGAGCGACT-TAATGT 58261 Query 204078 GTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136 | || | | | | || || ||| || ||||| || | || | | || || Sbjct 58260 CGTCCGGAATGT-TAGGGATGTTCTGGATAGAACCGTTCTCAGAAATGATGCGGTTCTTC 58202 Query 204137 GTCTCCTCCCCCCACATGCCCA-ACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | | ||| ||||| ||||| | || | ||| ||| || || |||||| | | Sbjct 58201 ATGGCATCCGACCACAAGCCCATATCT-ACCAGGTCCTTCAAGAGCCAGGGGTTAACAAC 58143 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || || || | || || | || | | | ||| ||| | || ||||| Sbjct 58142 CTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTATAAGGCTCGAAGCA 58083 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 ||||| ||||| | ||||| | || ||||| || ||||| || || || |||| | Sbjct 58082 TTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGAAGCAAGCT 58023 Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGT---CCAGTCGTGCA--TC 204370 |||||| | ||||| | | ||| ||| || ||| |||||| | || Sbjct 58022 GTTGCGAATACCGTGCTCCTTAACC---TGCTCGCGAAGGGTCTCCCAGTCCCAAAGGTC 57966 Query 204371 GCACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCC 204430 | | ||| |||||| |||||| || ||||| | ||| || | | ||||| ||| Sbjct 57965 GGA--GGGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCAGATGCTGGGGAACCC 57908 Query 204431 TTGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCA-CGAGGCGGCCATGGCGTG 204489 ||| | | | ||||| ||||| | || || ||||| |||||| | || || Sbjct 57907 TTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAG-TTGCACCGAGGCCGTCAAAGCAGC 57849 Query 204490 ATAGTACATGGTCTCAAAGATCTG 204513 | ||| ||||||||||||||||| Sbjct 57848 GTGGTAAATGGTCTCAAAGATCTG 57825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153321445840