Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq102 298 7e-76
seq168 102 1e-16
seq134 100 4e-16
seq35 93.3 5e-14
>seq102
Length=2690835
Score = 298 bits (330), Expect = 7e-76
Identities = 994/1533 (65%), Gaps = 35/1533 (2%)
Strand=Plus/Plus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || || || |||| || ||||| | ||| || || || || || ||
Sbjct 1199858 TCATCCTCCTCCTTGAACTTCTCGGCATCGGAAAGCATGCGCTCGATATCCTCCTTGGAC 1199917
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
|| | ||||| || || || || ||||||| | ||| || || | | |||| || |
Sbjct 1199918 AAGCGACCCTTGTCGTTGGTGATGATAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 1199977
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| || |||| ||||| || ||||| | |||||| | || | || || || |
Sbjct 1199978 GCGGAGACGTTCATGATACCGTTGGCATCGAGATCGAAGGTAACCTCGATCTGAGGAACA 1200037
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | ||||| || || | || || | || | | |||| ||| |
Sbjct 1200038 CCACGGGGGGCAGGGGGAATGCCAGTGAGCTCGAACTTGCCCATCAGGTTGTTGTCCTTG 1200097
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTG 6866
| || || ||||| || || || | ||| | ||||| || || || ||
Sbjct 1200098 GTGCGCTGGCGCTCACCCTCGTAAACCTGAATGAGGACACCG--GGCTGGTTGTCGGAGA 1200155
Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926
|| ||||||| | ||||| | ||||| || || || | ||||| | | ||
Sbjct 1200156 AGGTAGAGAAGACCTCAGACTTCTTGGTGGGAATGGTGGTGTTGCGGGGAATGAGCTTGG 1200215
Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986
|||| || ||||| ||| |||| || || || ||||| | ||||| ||| | |
Sbjct 1200216 TCATCATGCCACCAGCAGTCTCGATACCGAGGGAGAGAGGGGCAACGTC---GAGAAGGA 1200272
Query 6987 GG-TCT------TGAACA--GATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCG 7037
|| ||| || || || | | ||||| | | |||||||| || || |
Sbjct 1200273 GGATCTCGCTGGTGGACTTGGAGCTGGTG---TCACCAGACAGAATGGCGGCCTGAACGG 1200329
Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097
|| ||||| || || |||||||||||||| || | || || | || || ||||| |
Sbjct 1200330 CGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGA 1200389
Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157
| || || | | | | || | ||||| || || || |||||||| | ||||
Sbjct 1200390 AGTAGTCGGTAATGAGCTTCTGGACACGGGGGATACGGGTGGAGCCACCGACGAGGACGA 1200449
Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217
| || | || |||||||| || | ||| || ||||| || | |
Sbjct 1200450 TCTCGTGGACGAGGCTCTTATCGATTTTCGCGTCGGCGAGGACACGGTCGACGGGCTGGA 1200509
Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277
|| ||||| | ||| || || ||||| ||||| || ||||| ||||| || |
Sbjct 1200510 TAGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCTCGGGTGATGGAGGTGT 1200569
Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337
|||| |||| || ||| | | || || || || || | || || || | || || |
Sbjct 1200570 AGAAGTCAATACCCTCGAAGAGAGAGTCGATCTCGATAGAGGTCTGCGCGGAGGAGGAAA 1200629
Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397
|||||||| || ||||| || || || || | ||| ||||| || || || |
Sbjct 1200630 GAGTTCGCTTGGCACGCTCGCAGGCAGTGCGGAGACGTCGAAGCGCGCGAACATTGGAGC 1200689
Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457
| |||||| ||||| || | ||| || || | | ||||| || ||| | |
Sbjct 1200690 TCAAATCTTTTTTATGCTTTCTTTTGAATTCATTAACAAAGTGGTTAACGAGACGGTTGT 1200749
Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517
|||| || || ||||||| ||| || || || || || | ||||| || ||||||||
Sbjct 1200750 CGAAGTCCTCGCCACCCAGGTGAGTGTCACCAGCAGTTGACTTGACCTCGAAGATACCCT 1200809
Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577
| || ||| | | | |||||||| || ||||||||||| || || || ||||| ||||
Sbjct 1200810 CCTCGATGGTGAGGAGAGAAACATCGAAGGTACCACCACCGAGATCGAAGATGAGGACGT 1200869
Query 7578 T-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| ||| || | || | ||||| ||||||||||| || || || || || || || ||
Sbjct 1200870 TGCGT-TCACCCTCAATCTTCTTGTCGAGACCGTAGGCAATGGCGGCAGCAGTGGGCTCG 1200928
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || || ||| ||||||||||| | ||||| || || || || ||
Sbjct 1200929 TTGATGATTCGGAGGACGTTGAGGCCAGCAATGAGACCGGCATCCTTGGTAGCCTGGCGC 1200988
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| |||||| |||||||| ||||| || ||||| |||| | || ||| ||||||
Sbjct 1200989 TGGCTATCGTTGAAGTAGGCGGGGACAGTGACGACAGCGTTGTTAACGGTCTCACCGAGG 1201048
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | || ||| | || ||| || || || ||||| ||||| ||||| || | |
Sbjct 1201049 TAGGCCTCAGCGGTCTCACGCATCTTAGTGAGGACCATGGATGAGATCTCCTCGGGGGTG 1201108
Query 7817 AACTGTTTCGTT-TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC--- 7872
|| || | ||| || || || || || || || || ||||| || || ||||
Sbjct 1201109 AA-GGTCTTGTTCTCGCCCTTGAACTCGACCTCGATGATGGGCTT----GC--CACCCTT 1201161
Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932
| ||| | ||| | | | | ||||| ||| | ||||||| || |||||
Sbjct 1201162 GTCGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCATCGCTGAACTT 1201221
Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992
| ||||| | |||||| || || || || ||||| | ||||||||||| |||||
Sbjct 1201222 GCGGCCGATCAAACGCTTGGCGTCGAAGACGGTGTTCTGAGGGTTCATGGCGACCTGGTT 1201281
Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052
||| || || || ||||| ||||| || | || || || ||||| | || || ||
Sbjct 1201282 CTTGGCGGCATCTCCGATCAGACGCTC---GGTGTCGGTGAAACCGACGAAGGAAGGAGT 1201338
Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085
|||||||| || |||||||| ||||| || ||
Sbjct 1201339 GGTTCGATTGCCCTGGTCGTTGGCAATGATATC 1201371
Score = 140 bits (154), Expect = 4e-28
Identities = 362/545 (66%), Gaps = 15/545 (3%)
Strand=Plus/Minus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| || || |||||||| ||||| || ||| || | || ||| | | ||
Sbjct 1587678 AGGTCCTCGAATCGGGCACGGGTGATGGACATAGTGAAGTCCTCACCATCGAAGAGAGAG 1587619
Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
||||| || || || | || || || | || | || ||||| || ||||| || |
Sbjct 1587618 TCAATCTCGATAGTGGCCTGAGCACCGCTG--GACAGGGTACGCTTGGCACGCTCGCAAG 1587561
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421
| ||||| | ||| || || || || || | ||||| | ||| ||||| || ||
Sbjct 1587560 CAGTTCGGAGACGGCGCAGAGCGCGGGGATCGCCGGAGAGATCCTTCTTGCTCTTGCGGG 1587501
Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480
| ||||| | | |||| |||| |||| | | |||||||| | |||||||| ||
Sbjct 1587500 TGAACTCCTTCTTGCAGTGGTCGA-GGAGGTTGGTGTCGAAATCCTGACCACCCAGATGG 1587442
Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540
|| || || ||||| || ||||| |||| ||| || | ||||| | | || |||
Sbjct 1587441 GTGTCACCAGCGGTGGCCTTGACAGTGAAGACACCACCCTGGATGTTGAGGAGGGACACA 1587382
Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600
|| || ||||||||||| || || | || || ||||| || | ||| | ||||
Sbjct 1587381 TCGAAAGTACCACCACCGAGATCGTAGATCAGGACGTTGCGCTC--CTTCTCAG-ACTTA 1587325
Query 7601 TCG------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654
|| |||||||| ||||| || || || || || || || || || || || |
Sbjct 1587324 CCGGCGCCAAGACCGTAGGCGATGGCGGCAGCGGTGGGCTCGTTGATGATGCGGAGGACG 1587265
Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
|| || || ||||| | | || || || || || ||||| || ||||| ||||||
Sbjct 1587264 TTGAGACCGGCAATGGAACCGGCGTCCTTGGTGGCCTGTCGCTGGTTGTCGTTGAAGTAG 1587205
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774
|| || || || | ||| || | | ||| ||||| || || | | || || || ||
Sbjct 1587204 GCGGGAACAGTGATGACGGCCTTCTCGACCTTCTTGCCAAGCTTGGTCTCGGCAATCTCC 1587145
Query 7775 TTCAT 7779
|||||
Sbjct 1587144 TTCAT 1587140
>seq168
Length=1342871
Score = 102 bits (112), Expect = 1e-16
Identities = 224/336 (67%), Gaps = 6/336 (2%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| || ||||| | ||| || || || ||| | ||||| || || | |||
Sbjct 1279665 ATCGAAATCCTCGCCACCGAGGTGAGTGTCACCGTTGGTGGACTTGACCTCGAAAACACC 1279724
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| || | || | || | |||||| ||||||||||| || || ||| ||
Sbjct 1279725 GTTCTGGATCTCCAAGATGGAGATATCAAAGGTACCACCACCAAGATCGTAAACAGCGAC 1279784
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
| | ||| | || ||| ||||||||||| || | ||| || || || || ||
Sbjct 1279785 GACCCGGTCGGCCTC------CTTCTCGAGACCGTAGGCCAAAGCAGCGGCAGTAGGCTC 1279838
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|||| | ||| ||| ||| ||||||| ||| | ||||| || || |||||
Sbjct 1279839 GTTAACGACACGGAGAACGTTGAGGCCAGAAATCTGACCGGCATCCTTGGTACTCTGTCG 1279898
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| || |||||||||||||| ||||| || ||||| |||| | ||| ||| |||
Sbjct 1279899 CTGAGAGTCGTTAAAGTAGGCGGGGACAGTGACGACAGCGTTCTTGATGGGCTTTGAGAG 1279958
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791
||| | || || | || ||||| ||| | || ||
Sbjct 1279959 ATAAGCCTCAGCCGTTTCCTTCATCTTGTTGAGGAC 1279994
>seq134
Length=152861
Score = 100 bits (110), Expect = 4e-16
Identities = 291/444 (66%), Gaps = 13/444 (3%)
Strand=Plus/Minus
Query 105559 TCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTC 105618
|| || || |||||||||| ||| || ||||||| ||| | || | ||| ||| |
Sbjct 57262 TCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGTCACGAGCGCGG 57203
Query 105619 GCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCAT 105678
|| ||||| | || || ||| || | || | || || | || |||||||||||
Sbjct 57202 GCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGTCGGCGTGCCAG 57143
Query 105679 GGTTCTAAATAGACTGCAATAG-ACC------CTTTACGACGCCCCGCTTGATTGACATA 105731
|| || | || | || | || ||| ||| | ||||| || | ||| ||
Sbjct 57142 GGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCC----TGGTCGACGTA 57087
Query 105732 TCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGT 105791
|| || || ||| | || || | ||| ||||| | ||||| ||| || || || ||
Sbjct 57086 TCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTGGT 57027
Query 105792 TCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGC 105851
|| ||| | || | ||||| | ||| |||| | || || || || ||
Sbjct 57026 ACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCGATGCCTCCTGC 56967
Query 105852 CCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTC 105911
| ||| ||| ||||| || | || ||||| ||||||||||| || |||||
Sbjct 56966 CATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGTCTTC 56907
Query 105912 CTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACA 105970
||| | ||| |||||| || || |||| || || ||| || ||||| ||||||||||
Sbjct 56906 CTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGG-CTGAGGGGTACCCGCATTGAACA 56848
Query 105971 GAGTTGGTGTTGCATGAATGAACA 105994
| ||||||| || ||| ||||||
Sbjct 56847 GGGTTGGTGAAGCGTGAGTGAACA 56824
>seq35
Length=1002431
Score = 93.3 bits (102), Expect = 5e-14
Identities = 169/244 (69%), Gaps = 5/244 (2%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||||||||| || || || ||||| || ||| || |||| |||
Sbjct 485647 ATCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGACACC 485706
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|||||| | | || ||||| || ||||||||||| || || | || |
Sbjct 485707 CTGGTCAATGGAGAGAAGAGACACATCGAAGGTACCACCACCGAGATCGTA---GACAAT 485763
Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
|| | ||| ||| | | | |||| || ||||| || |||||||| || || || || |
Sbjct 485764 AATC-TGTCGCTCGCCGTCGGTCTTGTCCAGACCATAAGCGATAGCGGCGGCGGTGGGCT 485822
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
| || | || || || ||| ||||| ||||| | | ||||| || || || ||||
Sbjct 485823 CGTTGACAACTCGGAGGACGTTGAGGCCGGCAATGATACCGGCATCCTTGGTAGCCTGTC 485882
Query 7695 GTTG 7698
| ||
Sbjct 485883 GCTG 485886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131299498760
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