Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq134 183 4e-41
seq135 131 2e-25
seq101 109 6e-19
>seq134
Length=152861
Score = 183 bits (202), Expect = 4e-41
Identities = 1006/1589 (63%), Gaps = 45/1589 (3%)
Strand=Plus/Minus
Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566
|||||||||||||||||||| ||||||||| || | ||| | || || ||||
Sbjct 58357 GACTGAGACTGATCGATGAAGGCACCACGATCGGCGGACATTTGGAGGACCTGGCGTTGG 58298
Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626
||| ||||| || |||||||| | ||| || || || ||||||| ||||||
Sbjct 58297 GAAATCTCCCACACCGTCTTGTAGAGCGACTTAATGTCGTCCGGAATGTTAGGGATGTTC 58238
Query 109627 TGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACC 109686
|| ||||| || | | ||| | | |||||| | | |||||| | || |
Sbjct 58237 TGGATAGAACCGTTCTCAGAAATGATGCGGTTCTTCATGGCATCCGACCACAAGCCCATA 58178
Query 109687 TTTTTGAGATCGTCAACAAGATGCTTG--TTGACCACGACAAATTCACCAGCAAGTGTGC 109744
| | || || | ||||| | | || || || || ||||||||||| |
Sbjct 58177 TCTACCAGGTCCTT--CAAGAGCCAGGGGTTAACAACCTGGAACTCACCAGCAAGGACAC 58120
Query 109745 GTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTG 109804
| || |||||||||| | || || || ||||| || || || ||||| ||||| || |
Sbjct 58119 GGCGCTGGTAGATGTTCGAGGTATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCG 58060
Query 109805 CAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTA 109864
||| || || ||||| || || | || | ||||| || | ||| | | ||| |
Sbjct 58059 AAGTACTGGCAGTAGGCATAGGGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAA 58000
Query 109865 CCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACA 109924
|| |||| || | | ||||| || || | | || ||| ||| |||
Sbjct 57999 CCTGCTCGCGAAGGGTCTCCCAGTCCCAAAGGTCGGAGGGCTT-----CACGTTCC-ACA 57946
Query 109925 TATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCT 109984
|||| || || | |||||||| || || ||||||||||| || ||| | ||||
Sbjct 57945 TATCAAACTGGAGGATACCCTCAGATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCT 57886
Query 109985 CAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATAT 110044
| ||| || | | || ||| | || || || || || |||||||| || |
Sbjct 57885 CCTCCTTAGCGAGTTGCACCGAGGCCGTCAAAGCAGCGTGGTAAATGGTCTCAAAGATCT 57826
Query 110045 GAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACAT 110104
| |||| |||| ||| | |||||||| | | | | | || |||
Sbjct 57825 GCTTGTTCAACTCACGAGCCTCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCAT 57766
Query 110105 CCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAG 110164
| || |||||||| ||||||| ||||||||| || || |||||| | || ||
Sbjct 57765 CAGCAAGACCCTGGACACCGACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGCCT 57706
Query 110165 TTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCG 110224
| |||||| |||| |||||| | | || | || ||| || |
Sbjct 57705 CGATGATGGGGTAGTGGTTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTG 57646
Query 110225 TGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTG---ACATATTTGG 110281
||| || || || || | | | ||| | | | ||| || | | ||| | |
Sbjct 57645 TGACCTCGTGTAGCTTCTGGAAGTCGTA-GCAGCC--CTCGTTGTAGTCAACAAAGGAAG 57589
Query 110282 GGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAA 110341
| ||||| | || || |||||||| |||| ||| || | ||| || | |
Sbjct 57588 GCAGAGCCAATGATGCGAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGA 57529
Query 110342 TTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGT 110401
| || || || | ||||||||| |||| |||| ||||||||| || ||| ||
Sbjct 57528 TCTCAGTGCAAAGGTTGGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGT 57469
Query 110402 TGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGG 110461
|||| ||||| ||||||||| | ||| | || ||||| ||||| | || | ||||
Sbjct 57468 TGCAGCTGTCCTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGG 57409
Query 110462 CCTTCCATA-CATCGGCGGCGGGGACAGT--TGCG---TTAGCGAGACCTTCCTCCTCGT 110515
| | ||| | | || | ||| | || |||| || || || ||| ||| |
Sbjct 57408 CATACCACAGCTTCTG-GGCCTTCATGGTCTTGCGACCTTTGCCAG-----CCTGCTCAT 57355
Query 110516 ACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC-CTTG 110574
|||| ||||| | ||| || || | ||||| ||||| ||| ||| || ||
Sbjct 57354 ACTTCTCGTACAGCTTCTCGAACTCATCACCGTAGCAATCAGCAAG-CCCGGGGCACTCA 57296
Query 110575 TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGA 110634
| ||| || | ||| | ||| | || || ||| || | |||||||||||| || ||
Sbjct 57295 TTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGG 57236
Query 110635 ATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGT 110694
||||||| ||| |||| | |||||| || || ||||| | || ||||| |||
Sbjct 57235 ATCCACAGGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGC 57176
Query 110695 AGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA------GACAGCGATG 110748
|| ||||| || || | | || | |||||| || || || || || ||| |
Sbjct 57175 AGATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCG 57116
Query 110749 GATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808
| || ||| | | || |||||| || || || || ||| |||||||| | ||||
Sbjct 57115 GGTCGCTT--GTTG-CCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGC 57059
Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGA 110868
|||||||| | |||| ||| || || ||||| ||| || |||||||
Sbjct 57058 ATAGGAATGACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGG 56999
Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGT 110927
|| ||| | | | ||| || || || ||| ||| || |||| | ||| |
Sbjct 56998 ATTCGGTGCACGTTGAGACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCT-T 56940
Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987
||| || | || ||||| || || ||| |||| || ||| || ||||| |||||
Sbjct 56939 GAGGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGA 56880
Query 110988 CATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047
|| |||||| |||| || ||||||||||| || || |||| || ||| ||||||| |
Sbjct 56879 CAGCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAG--C 56822
Query 111048 TTG--GGACATCTTGTTGTATGTGTCGAG 111074
||| |||||| |||||| || || ||
Sbjct 56821 TTGCTGGACATGAGGTTGTAGGTCTCCAG 56793
>seq135
Length=1646924
Score = 131 bits (144), Expect = 2e-25
Identities = 304/447 (68%), Gaps = 20/447 (4%)
Strand=Plus/Plus
Query 11536 TCAAGAATATCGACACGGTTTGTAGCGGCAATGACTACAATGCCAG-TCTCAT-TGTCGA 11593
|| || || ||| | ||||| || |||| | || |||| || | |||| | ||| |
Sbjct 911698 TCGAGCATGTCGGCTCGGTTGGTGCCGGCCAAAACGACAA--CCTGCTCTCGTGTGTTAA 911755
Query 11594 AACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG-----GA 11648
| ||||||||||| || || | |||||| | || || ||||| |||||| ||
Sbjct 911756 ATCCGTCCATTTCGGTCAGGATCTGGTTAAGTGTTGCCTCCCGCTCGTCGTTGCCACCGA 911815
Query 11649 GGGCAT-ACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGA 11707
| | | ||| | || |||| |||| ||||| || || |||||||| | ||
Sbjct 911816 AGCCTTTACCGCTCTCCTGACGCGCTCGGCCGATGGCGTCGATTTCGTCGATGAAGATGA 911875
Query 11708 TACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACAC 11767
| || ||| ||| || ||| |||| | || || || || | |||||||
Sbjct 911876 TGCAGGGTGCGTTCTTTCGGCCCTCGGCGAACAAGTCTCGCACTCGAGAAGGGCCAACAC 911935
Query 11768 CTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGACTC 11825
| ||||||||||||||||| | | | || | ||||||| |||||||||| ||||||
Sbjct 911936 CCACGAACATCTCAACGAACTCGGAACCGCTCA-CACTGAA-GAAGGGAACACCAGACTC 911993
Query 11826 ACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGC 11885
|| || |||| || || || || ||||| ||||| || | ||||||||||| ||
Sbjct 911994 GCCGGCCGTGGCCTTGGCAAGTAGTGTTTTACCAGTACCCGGAGGACCAGCGAGAATCGC 912053
Query 11886 GCCACGGGGGATCTTGGCACC--ACTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTC 11942
||| ||||| |||||||| || |||| | || | |||||||| |||||||||
Sbjct 912054 GCCTCGGGGAATCTTGGCTCCTAGCTTCTCGAACT---TCTCAGGCTGTTTGAGGAAGCT 912110
Query 11943 CACAATCTCCTCAAGTTCCTCCTTGGC 11969
|||| |||| | |||| ||||||
Sbjct 912111 GACAAACTCCATGATTTCCATCTTGGC 912137
>seq101
Length=835023
Score = 109 bits (120), Expect = 6e-19
Identities = 334/501 (67%), Gaps = 23/501 (5%)
Strand=Plus/Minus
Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267
|| ||||| || | ||| |||||||| || ||||| || | || |||||||| |||||
Sbjct 111920 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 111861
Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGACG 119326
||||| || || || || || | || | | |||| |||| | ||||||||
Sbjct 111860 AAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTG-CCAAGTGCCACAAGAAGACG 111802
Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386
|||| ||| ||||||| |||| ||| ||||| ||||| || | ||| ||
Sbjct 111801 GTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAGCGCA 111742
Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTG 119446
|| || || ||| | ||| | || |||||| | ||||| || | | ||| |
Sbjct 111741 AGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATCTCACG 111682
Query 119447 AATAGTTTCTG-TCGATGGTTTGTTTCT-CAAG----AGTTTAAACAACTCTACGGCAAA 119500
||| | ||| | | ||| | | |||| |||| ||| || || ||| ||
Sbjct 111681 AATGAT--CTGCTTGCTGGCTCGGTTCTTCAAGTGAGAGTGTAGGAGACA----GGCGAA 111628
Query 119501 TTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAA-GCAAAGTCCAGGCA 119559
|| || || || ||||| ||||| |||||||| || ||| | ||| |||||||
Sbjct 111627 GTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAG-CCAGGCA 111569
Query 119560 TGAGTCCTCTTTTCTTTAGCCAAAAGATGG-CACAAAAACTTCCAGAAAAGAAGATGCCC 119618
|||| || | ||||| ||||| ||||||| | | ||| | ||| ||||| || |||
Sbjct 111568 TGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGC-ACCACTGAAGAAAATACCC 111510
Query 119619 TCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCA 119674
|| || |||||||| | ||||||| ||||||| | ||| |||||| || |||
Sbjct 111509 TCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGAT-GAGTTCTTGTCCTGGATCCA 111451
Query 119675 CTTGAGAGCCCAGTTGGCCTT 119695
| | |||||| | ||||||
Sbjct 111450 CCGAATAGCCCAATCGGCCTT 111430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588974608544200
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