Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq134 183 4e-41 seq135 131 2e-25 seq101 109 6e-19 >seq134 Length=152861 Score = 183 bits (202), Expect = 4e-41 Identities = 1006/1589 (63%), Gaps = 45/1589 (3%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACACTTTTGG 109566 |||||||||||||||||||| ||||||||| || | ||| | || || |||| Sbjct 58357 GACTGAGACTGATCGATGAAGGCACCACGATCGGCGGACATTTGGAGGACCTGGCGTTGG 58298 Query 109567 CTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTT 109626 ||| ||||| || |||||||| | ||| || || || ||||||| |||||| Sbjct 58297 GAAATCTCCCACACCGTCTTGTAGAGCGACTTAATGTCGTCCGGAATGTTAGGGATGTTC 58238 Query 109627 TGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACC 109686 || ||||| || | | ||| | | |||||| | | |||||| | || | Sbjct 58237 TGGATAGAACCGTTCTCAGAAATGATGCGGTTCTTCATGGCATCCGACCACAAGCCCATA 58178 Query 109687 TTTTTGAGATCGTCAACAAGATGCTTG--TTGACCACGACAAATTCACCAGCAAGTGTGC 109744 | | || || | ||||| | | || || || || ||||||||||| | Sbjct 58177 TCTACCAGGTCCTT--CAAGAGCCAGGGGTTAACAACCTGGAACTCACCAGCAAGGACAC 58120 Query 109745 GTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTG 109804 | || |||||||||| | || || || ||||| || || || ||||| ||||| || | Sbjct 58119 GGCGCTGGTAGATGTTCGAGGTATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCG 58060 Query 109805 CAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTTA 109864 ||| || || ||||| || || | || | ||||| || | ||| | | ||| | Sbjct 58059 AAGTACTGGCAGTAGGCATAGGGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAA 58000 Query 109865 CCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCATCCCACA 109924 || |||| || | | ||||| || || | | || ||| ||| ||| Sbjct 57999 CCTGCTCGCGAAGGGTCTCCCAGTCCCAAAGGTCGGAGGGCTT-----CACGTTCC-ACA 57946 Query 109925 TATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCCCT 109984 |||| || || | |||||||| || || ||||||||||| || ||| | |||| Sbjct 57945 TATCAAACTGGAGGATACCCTCAGATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCT 57886 Query 109985 CAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAATAT 110044 | ||| || | | || ||| | || || || || || |||||||| || | Sbjct 57885 CCTCCTTAGCGAGTTGCACCGAGGCCGTCAAAGCAGCGTGGTAAATGGTCTCAAAGATCT 57826 Query 110045 GAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGAATAAACACAT 110104 | |||| |||| ||| | |||||||| | | | | | || ||| Sbjct 57825 GCTTGTTCAACTCACGAGCCTCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCAT 57766 Query 110105 CCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAGCAG 110164 | || |||||||| ||||||| ||||||||| || || |||||| | || || Sbjct 57765 CAGCAAGACCCTGGACACCGACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGCCT 57706 Query 110165 TTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCTTCG 110224 | |||||| |||| |||||| | | || | || ||| || | Sbjct 57705 CGATGATGGGGTAGTGGTTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTG 57646 Query 110225 TGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTG---ACATATTTGG 110281 ||| || || || || | | | ||| | | | ||| || | | ||| | | Sbjct 57645 TGACCTCGTGTAGCTTCTGGAAGTCGTA-GCAGCC--CTCGTTGTAGTCAACAAAGGAAG 57589 Query 110282 GGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAA 110341 | ||||| | || || |||||||| |||| ||| || | ||| || | | Sbjct 57588 GCAGAGCCAATGATGCGAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGA 57529 Query 110342 TTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGT 110401 | || || || | ||||||||| |||| |||| ||||||||| || ||| || Sbjct 57528 TCTCAGTGCAAAGGTTGGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGT 57469 Query 110402 TGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGG 110461 |||| ||||| ||||||||| | ||| | || ||||| ||||| | || | |||| Sbjct 57468 TGCAGCTGTCCTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGG 57409 Query 110462 CCTTCCATA-CATCGGCGGCGGGGACAGT--TGCG---TTAGCGAGACCTTCCTCCTCGT 110515 | | ||| | | || | ||| | || |||| || || || ||| ||| | Sbjct 57408 CATACCACAGCTTCTG-GGCCTTCATGGTCTTGCGACCTTTGCCAG-----CCTGCTCAT 57355 Query 110516 ACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGC-CTTG 110574 |||| ||||| | ||| || || | ||||| ||||| ||| ||| || || Sbjct 57354 ACTTCTCGTACAGCTTCTCGAACTCATCACCGTAGCAATCAGCAAG-CCCGGGGCACTCA 57296 Query 110575 TCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGA 110634 | ||| || | ||| | ||| | || || ||| || | |||||||||||| || || Sbjct 57295 TTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGG 57236 Query 110635 ATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGT 110694 ||||||| ||| |||| | |||||| || || ||||| | || ||||| ||| Sbjct 57235 ATCCACAGGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGC 57176 Query 110695 AGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATA------GACAGCGATG 110748 || ||||| || || | | || | |||||| || || || || || ||| | Sbjct 57175 AGATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCG 57116 Query 110749 GATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGC 110808 | || ||| | | || |||||| || || || || ||| |||||||| | |||| Sbjct 57115 GGTCGCTT--GTTG-CCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGC 57059 Query 110809 ATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGA 110868 |||||||| | |||| ||| || || ||||| ||| || ||||||| Sbjct 57058 ATAGGAATGACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGG 56999 Query 110869 ATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCAC-ACTCTGT 110927 || ||| | | | ||| || || || ||| ||| || |||| | ||| | Sbjct 56998 ATTCGGTGCACGTTGAGACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCT-T 56940 Query 110928 GAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGA 110987 ||| || | || ||||| || || ||| |||| || ||| || ||||| ||||| Sbjct 56939 GAGGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGA 56880 Query 110988 CATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACC 111047 || |||||| |||| || ||||||||||| || || |||| || ||| ||||||| | Sbjct 56879 CAGCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAG--C 56822 Query 111048 TTG--GGACATCTTGTTGTATGTGTCGAG 111074 ||| |||||| |||||| || || || Sbjct 56821 TTGCTGGACATGAGGTTGTAGGTCTCCAG 56793 >seq135 Length=1646924 Score = 131 bits (144), Expect = 2e-25 Identities = 304/447 (68%), Gaps = 20/447 (4%) Strand=Plus/Plus Query 11536 TCAAGAATATCGACACGGTTTGTAGCGGCAATGACTACAATGCCAG-TCTCAT-TGTCGA 11593 || || || ||| | ||||| || |||| | || |||| || | |||| | ||| | Sbjct 911698 TCGAGCATGTCGGCTCGGTTGGTGCCGGCCAAAACGACAA--CCTGCTCTCGTGTGTTAA 911755 Query 11594 AACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTG-----GA 11648 | ||||||||||| || || | |||||| | || || ||||| |||||| || Sbjct 911756 ATCCGTCCATTTCGGTCAGGATCTGGTTAAGTGTTGCCTCCCGCTCGTCGTTGCCACCGA 911815 Query 11649 GGGCAT-ACCACCTGCCGAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGA 11707 | | | ||| | || |||| |||| ||||| || || |||||||| | || Sbjct 911816 AGCCTTTACCGCTCTCCTGACGCGCTCGGCCGATGGCGTCGATTTCGTCGATGAAGATGA 911875 Query 11708 TACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACAC 11767 | || ||| ||| || ||| |||| | || || || || | ||||||| Sbjct 911876 TGCAGGGTGCGTTCTTTCGGCCCTCGGCGAACAAGTCTCGCACTCGAGAAGGGCCAACAC 911935 Query 11768 CTACGAACATCTCAACGAAGTTTG--CGGCAGAACACTGAATGAAGGGAACATTAGACTC 11825 | ||||||||||||||||| | | | || | ||||||| |||||||||| |||||| Sbjct 911936 CCACGAACATCTCAACGAACTCGGAACCGCTCA-CACTGAA-GAAGGGAACACCAGACTC 911993 Query 11826 ACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGC 11885 || || |||| || || || || ||||| ||||| || | ||||||||||| || Sbjct 911994 GCCGGCCGTGGCCTTGGCAAGTAGTGTTTTACCAGTACCCGGAGGACCAGCGAGAATCGC 912053 Query 11886 GCCACGGGGGATCTTGGCACC--ACTTC-CAAAGTAGCGCTCAGGCTTCTTGAGGAAGTC 11942 ||| ||||| |||||||| || |||| | || | |||||||| ||||||||| Sbjct 912054 GCCTCGGGGAATCTTGGCTCCTAGCTTCTCGAACT---TCTCAGGCTGTTTGAGGAAGCT 912110 Query 11943 CACAATCTCCTCAAGTTCCTCCTTGGC 11969 |||| |||| | |||| |||||| Sbjct 912111 GACAAACTCCATGATTTCCATCTTGGC 912137 >seq101 Length=835023 Score = 109 bits (120), Expect = 6e-19 Identities = 334/501 (67%), Gaps = 23/501 (5%) Strand=Plus/Minus Query 119208 TAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTGAGATGTTTTCCATA 119267 || ||||| || | ||| |||||||| || ||||| || | || |||||||| ||||| Sbjct 111920 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 111861 Query 119268 AAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGACG 119326 ||||| || || || || || | || | | |||| |||| | |||||||| Sbjct 111860 AAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTG-CCAAGTGCCACAAGAAGACG 111802 Query 119327 ATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGATTACA 119386 |||| ||| ||||||| |||| ||| ||||| ||||| || | ||| || Sbjct 111801 GTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAGCGCA 111742 Query 119387 CGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGAGTG 119446 || || || ||| | ||| | || |||||| | ||||| || | | ||| | Sbjct 111741 AGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATCTCACG 111682 Query 119447 AATAGTTTCTG-TCGATGGTTTGTTTCT-CAAG----AGTTTAAACAACTCTACGGCAAA 119500 ||| | ||| | | ||| | | |||| |||| ||| || || ||| || Sbjct 111681 AATGAT--CTGCTTGCTGGCTCGGTTCTTCAAGTGAGAGTGTAGGAGACA----GGCGAA 111628 Query 119501 TTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAA-GCAAAGTCCAGGCA 119559 || || || || ||||| ||||| |||||||| || ||| | ||| ||||||| Sbjct 111627 GTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAG-CCAGGCA 111569 Query 119560 TGAGTCCTCTTTTCTTTAGCCAAAAGATGG-CACAAAAACTTCCAGAAAAGAAGATGCCC 119618 |||| || | ||||| ||||| ||||||| | | ||| | ||| ||||| || ||| Sbjct 111568 TGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGC-ACCACTGAAGAAAATACCC 111510 Query 119619 TCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GAACCA 119674 || || |||||||| | ||||||| ||||||| | ||| |||||| || ||| Sbjct 111509 TCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGAT-GAGTTCTTGTCCTGGATCCA 111451 Query 119675 CTTGAGAGCCCAGTTGGCCTT 119695 | | |||||| | |||||| Sbjct 111450 CCGAATAGCCCAATCGGCCTT 111430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974608544200