Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq134 158 1e-33
>seq134
Length=152861
Score = 158 bits (174), Expect = 1e-33
Identities = 560/868 (65%), Gaps = 23/868 (3%)
Strand=Plus/Minus
Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516
|| || || | |||||| | |||||||||||| |||||| | | |||||| |
Sbjct 57589 GGCAGAGCCAATGATGCGAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATG 57530
Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576
|| || || || | ||||||||| ||| || |||| ||||| ||||| || || |
Sbjct 57529 ATCTCAGTGCAAAGGTTGGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGG 57470
Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636
||||| ||||||||||||||| | || | || || || ||||| | || | ||
Sbjct 57469 TTGCAGCTGTCCTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATG 57410
Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG-GCCCGT--CCCTCCGCCTCGTA 106692
|| | ||||| | || | | || |||| ||| | || | || || ||| ||
Sbjct 57409 GCATACCACAGCTTCTGGGCCT----TCATGGTCTTGCGACCTTTGCCAGCCTGCTCATA 57354
Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752
||| ||| || || ||||| ||||| || | || || || || |
Sbjct 57353 CTTCTCGTACAGCTTCTCGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATT 57294
Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812
|| || | |||| ||| | || || ||| || ||||||||||| || || || ||
Sbjct 57293 GGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGAT 57234
Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872
|||||||| | || | || | | || || ||||| | || ||||| || |
Sbjct 57233 CCACAGGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAG 57174
Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATA------GA 106926
|| | ||| || | | || |||||||| |||||||| || | |||| | |
Sbjct 57173 ATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGG 57114
Query 106927 TCCCTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985
|| ||| | | ||||| || | || || || || ||| ||| || || || ||||
Sbjct 57113 TCGCTTGTTGCCGCCC----TGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCA 57058
Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCA 107045
| ||||| | ||||| || || || || || ||| ||| |||| | |
Sbjct 57057 TAGGAATGACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGA 56998
Query 107046 CATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAA 107105
|| | || | || || || || ||| ||| ||||| ||||| | | |
Sbjct 56997 TTCGGTGCACGTTGAGACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGA 56938
Query 107106 GAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACA 107165
| || | |||||||||| ||| ||| ||||| || | | |||||||| ||||
Sbjct 56937 GGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACA 56878
Query 107166 TCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTT 107225
||| || || ||||| |||||||| |||||||||| |||||| ||||| | |||
Sbjct 56877 GCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAAC--AGCTT 56820
Query 107226 G--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGAT 107283
| |||||| || ||| ||||||| |||| || ||||| || || ||||||||
Sbjct 56819 GCTGGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGAC 56760
Query 107284 GGCCACACGCATAAACATGTATTGGGGT 107311
|| |||||||| | ||||| || |||
Sbjct 56759 AGCGACACGCATGATCATGTGCTGAGGT 56732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589979406170360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |