Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq134 334 1e-86 seq101 129 1e-24 >seq134 Length=152861 Score = 334 bits (370), Expect = 1e-86 Identities = 1230/1884 (65%), Gaps = 92/1884 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||| |||||| ||||||| || ||||||||||||||||| Sbjct 58492 ACAGTGAACTGGATGGGAGCAGCGGCAGCCGTGGTGCGGAGGTAGTACATGCCGGTCTTG 58433 Query 212613 AGGCC---CTTGCCCCAGCCGTGC-ATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATAT 212667 || || ||| |||||| ||| | |||||| |||| ||| |||| | || Sbjct 58432 AGACCGAGCTT---CCAGCC-TGCGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATTG 58384 Query 212668 TCTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGG 212727 | |||| | | |||| | ||| ||||||||| ||| || ||||| | Sbjct 58383 TGGGGTCTTTCATGTGG---------ATGTTGAGGGACTGAGACTGATCGATGAAGGCAC 58333 Query 212728 CCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGA 212787 | | || |||| ||| | | || | | ||||| | ||||||||| |||||| ||| Sbjct 58332 CACGATCGGCGGACATTTGGAGGACCTGGCGTTGGGAAATCTCCCACACCGTCTTGTAGA 58273 Query 212788 TTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGG 212844 || | ||| || || | | ||||||||||| | ||| || | | ||| Sbjct 58272 GCGACTTAATGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAGAAATGA 58213 Query 212845 TCAGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCT-CCAGGCACTTGACCAGG 212903 | | | | |||| | || ||| | |||| | ||| ||||| ||| | || Sbjct 58212 TGCGGTTCTT---CATGGCATCCGACCACAAGCCCATA-TCTACCAGGTCCTTCAAGAGC 58157 Query 212904 TGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTG 212963 ||||| || | |||||| ||||| | || || | | |||||| | ||| || || Sbjct 58156 CAGGGGTTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTA 58097 Query 212964 TAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGA 213023 || ||||||| || ||||| || ||||| ||||| | ||| ||||| || ||||| || Sbjct 58096 TAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGG 58037 Query 213024 GCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGC-CGAAGC-TCTGCCC 213081 || | || | ||||| | | |||||||| | | || | ||||| ||| ||| Sbjct 58036 GCGAGAAGCAAGCTGTTGCGAATACCGTGCTC-CTTAACCTGCTCGCGAAGGGTCT-CCC 57979 Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGC 213141 ||||||| ||||| | ||||||||||||||| |||||||| | ||| | Sbjct 57978 AGTCCCAA---------AGGTCGGAGGGCTTCACGTTCCACATATCAAACTGGAGGATAC 57928 Query 213142 CTT----TGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGC 213197 | | |||| ||| |||| | | ||||| || || | |||||| || || Sbjct 57927 CCTCAGATGCT----GGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGT 57872 Query 213198 TCGCAG-GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTT 213256 | ||| || ||| || ||||||| ||| ||||| ||||| |||| | |||| | || Sbjct 57871 T-GCACCGAGGCCGTCAAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTC 57813 Query 213257 CTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTG 213316 ||||| |||||| ||||||||| | |||| ||||||| || ||||| Sbjct 57812 ACGAGCCTCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTG 57753 Query 213317 GACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTA 213376 ||| |||| || ||||||| ||| | || ||| ||| | ||| | |||||| Sbjct 57752 GACACCGACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGCCTCGATGATGGGGTA 57693 Query 213377 AAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAG 213436 |||| |||||| |||||||| | ||||||| | | || | ||||| | | || Sbjct 57692 GTGGTTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAG 57633 Query 213437 GTACTCGTGATTGAACACGTAGCCCCCGTCCTGC---ACAAACTCAGGCAGGGCGA-TGC 213492 | || | | | | | ||||| ||| | ||||| |||||| || | || Sbjct 57632 CTTCTGGAAGTCGTA---GCAGCCCTCGTTGTAGTCAACAAAGGAAGGCAGAGCCAATGA 57576 Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCAC 213551 || | || |||||||| || ||||| | | ||| | |||||| |||||||| ||||| Sbjct 57575 TG-CGAGATTGCAAACAGCGACCTCATCGGGAG-CACAGTACTCGATGATCTCAGTGCAA 57518 Query 213552 AGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TC 213610 |||||| | || |||||||||||||||| ||||| | ||| || | |||| || Sbjct 57517 AGGTTGGAACTGCGAATGGTGCCCAGGTTCTTCTGGTT-GCTTTTACGGTTGCAGCTGTC 57459 Query 213611 CTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAG 213668 ||||||||||||| | ||| ||||| || ||| | | ||| || ||| ||| Sbjct 57458 CTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGAT--GGCATACCAC 57401 Query 213669 AGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAG 213728 || | | |||||| | | | ||| | | || | ||| |||| ||||| Sbjct 57400 AGCTTCTGGGCCTTCATGGTCTTGC-GACCTTTGCCAGCCTG--CTCATACTTCTCGTAC 57344 Query 213729 AGCTCGTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACAT 213787 |||| | ||| || | || || | | | | || || || || ||| ||||| Sbjct 57343 AGCTTCTCGAACTCATCACCGTAGCAATCAG-CAAGCCCGGGGCACTCATTGGGGCACAT 57285 Query 213788 GAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCG 213846 ||| ||||||| |||| | |||| ||| | || ||||||||| || |||| |||||| | Sbjct 57284 GAGAGTCCAGTCGCCGTTCTTCTC-GACACGCTTCATGAACAGATCGGGGATCCACAGGG 57226 Query 213847 CGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAA 213906 | ||||| ||| | | | || ||| || ||| ||||||||||| | | Sbjct 57225 CCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGA 57166 Query 213907 AGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCT 213963 | ||||| | ||| |||||||| ||||| | ||| ||||| || || || | || | | Sbjct 57165 ATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGT 57106 Query 213964 TGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCC 214023 ||||||||||||| || | || ||||||||| || || | || | | | Sbjct 57105 TGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACAC 57046 Query 214024 CGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCAT 214081 | ||||| |||||||| || || || || ||||||| ||| | | | ||| | | Sbjct 57045 CATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGT 56986 Query 214082 GGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCAT 214141 |||| || ||||| || || ||||||||||||||| || | | | || || Sbjct 56985 TGAGA--CCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTA 56928 Query 214142 GATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCT 214201 ||| ||| | |||||||| || | | || | || ||||||| || ||||| ||| Sbjct 56927 GATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTG 56868 Query 214202 GGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAG 214261 | | || | ||||| || || || || || | | | |||| | || | ||| Sbjct 56867 AGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAG 56808 Query 214262 CCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCAT 214321 |||||||||||||||| |||||||| ||| | |||| | ||| Sbjct 56807 GTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGCAT 56748 Query 214322 CAGCATGTGCTGGGGCCTCTCTATGGGTCCTTTG---GGGCCCTTGAGCAGGTAGGAGCG 214378 | ||||||||| || | ||| | || ||| | ||| || |||||||| || Sbjct 56747 GATCATGTGCTGAGGTCGCTC-AACAATC--TTGCCATCGATCTTCAGGAGGTAGGATCG 56691 Query 214379 CTCCAGAGTCTTGAACCCAAAGTA 214402 ||| ||||||||||| || ||||| Sbjct 56690 CTCTAGAGTCTTGAAGCCGAAGTA 56667 >seq101 Length=835023 Score = 129 bits (142), Expect = 1e-24 Identities = 344/520 (66%), Gaps = 17/520 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || | | ||||||||||| Sbjct 111924 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 111865 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA-GCA 47957 ||||||| ||||||||||| | || || | | | || ||| || || | | Sbjct 111864 CATGAAGTCGAAGGGGTTGGCAGACTTGTAAATCT-TCTCGTTGCCAAGTGCCACAAGAA 111806 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | | || || || |||||||||||| ||||||| ||||||||| | || | Sbjct 111805 GACGGTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAG 111746 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 |||| |||| || || ||||||| ||| || | || || || | |||| Sbjct 111745 CGCAAGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATCT 111686 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTT---GGCATAGAGCATG---C 48131 ||| || |||| ||| || ||| ||| | | || | | | | Sbjct 111685 C----ACGAATGA-TCTGC----TTGCTGGCTCGGTTCTTCAAGTGAGAGTGTAGGAGAC 111635 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 |||| ||||| |||||| ||| || || || |||||| |||||||||| | | Sbjct 111634 AGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGC 111575 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||||||||| || | || ||||||||||| || | |||||||| ||| |||||| | Sbjct 111574 CAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAAAA 111515 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 | ||||| || || ||||| || || | || | ||||| | ||||||||| || Sbjct 111514 TACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTGGA 111455 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 |||| || ||||| || |||||||| |||||| || Sbjct 111454 TCCACCGAATAGCCCAATCGGCCTTCTTTCGGATGCAAGG 111415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530599253760