Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq134 201 2e-46
seq101 127 4e-24
>seq134
Length=152861
Score = 201 bits (222), Expect = 2e-46
Identities = 835/1287 (65%), Gaps = 63/1287 (5%)
Strand=Plus/Minus
Query 221416 CGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGG 221474
||||| ||||||||||| ||||||||||||||| |||||| | ||| | |||||||
Sbjct 57860 CGTCAAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAA-CTCACGAGCCTCGG 57802
Query 221475 GAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534
| || ||||||||| || || | | ||| | || || || ||||| || |||| ||
Sbjct 57801 GGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGACAC 57742
Query 221535 CGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592
| ||||| | ||| | | ||||| | |||| || || | ||| || ||||||
Sbjct 57741 CAATGGGTCGGTGACGCATGTTGCTGTTGCGG--GCCTCGATGATGGGGTAGTGGTTGAC 57684
Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652
|||||| | ||||| | ||| | || || | |||||| |||||||||
Sbjct 57683 GTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTCTGGAA 57624
Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGC-AACGC 221711
| | | || ||| |||| | | || ||||| | || || || |
Sbjct 57623 GTCGTA---------GCAGCCCTCGTTGTAG---TCAACAAAGGAAGGCAGAGCCAATGA 57576
Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTA---TACTGTATGATCTCTGTAC 221768
|| | || || || || || ||||| || | | | |||| |||||||| || |
Sbjct 57575 TG-CGAGATTGCAAACAGCGACCTCATC---GGGAGCACAGTACTCGATGATCTCAGTGC 57520
Query 221769 AGAGGTTGCTGCACTTG--ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826
| |||||| | ||| ||||| ||||||| || || || || || ||| ||||
Sbjct 57519 AAAGGTTG--GAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTG-CAGC 57463
Query 221827 -GTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885
||||||||||||||| || || ||| || || ||||||| ||| || | ||
Sbjct 57462 TGTCCTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACC 57403
Query 221886 AGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCG---GTCTTTTCATACCCGG 221942
| || | ||||| || | | ||||| ||| | | | || ||||||
Sbjct 57402 ACAGCT-TCTGGGCCTT--CATGGTCTTGCG---ACCTTTGCCAGCCTGCTCATACTTCT 57349
Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002
|| ||| | || |||| |||||||| || | || || || ||| ||| |
Sbjct 57348 CGTACAGCTTCTCGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGC 57289
Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062
|||| ||| |||||| ||| | | ||| | || |||||| || || ||||||||||
Sbjct 57288 ACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACA 57229
Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122
| ||| || | || | | || || ||| ||||| ||| || | ||||||||
Sbjct 57228 GGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCA 57169
Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182
| || ||||||| ||| |||||||| ||||| || || | ||| | ||| ||||||||||
Sbjct 57168 AGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCT 57109
Query 222183 TGTTGCCACCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTAC 222240
||||||| ||||| || || ||| ||| | |||||||| || || | || |
Sbjct 57108 TGTTGCCGCCCTGGTCGACGTATC--GAGCAGTGTTGTTGAAGACACGGAGCATAGGAAT 57051
Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACT 222300
| || ||||| |||||||| || |||||| | ||| ||| | || | |
Sbjct 57050 GACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCAC---GGATTCG 56994
Query 222301 G-GCA----GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355
| ||| || | ||||| || || || || ||||||||||| || |||||||
Sbjct 56993 GTGCACGTTGAGA--CCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGG 56936
Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415
||||| ||| || || || ||| ||||| | || | ||| || || || |||| |
Sbjct 56935 GTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGC 56876
Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGC-CCCT 222474
|||| | | || || || || ||||| || || ||||| || || ||| ||
Sbjct 56875 TGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAA-CAGCTTGCT 56817
Query 222475 AGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGG 222533
||||| || | ||| ||||| | ||| | |||||| ||| ||| || | | | |
Sbjct 56816 GGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCG-ACAG 56758
Query 222534 CGCATCTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAG 222591
|| | |||| ||||| ||| || | ||| ||| || | || || || ||
Sbjct 56757 CGACACGCATGATCATGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCT--TCAGGAG 56700
Query 222592 GTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAAC 222651
||| ||| || ||||||||||| || ||||| | | || || || | | | | ||
Sbjct 56699 GTAGGATCGCTCTAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAATCACGGTCATAGAC 56640
Query 222652 CACGGCGGCGTCCAGCTCCGACTTGTG 222678
| ||| | ||||| |||| |||||
Sbjct 56639 GATGGCAGAGTCCAACTCCTCTTTGTG 56613
>seq101
Length=835023
Score = 127 bits (140), Expect = 4e-24
Identities = 328/493 (67%), Gaps = 13/493 (3%)
Strand=Plus/Plus
Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893
||||| || ||||||| | | ||| | | | |||| | |||| ||||| || ||
Sbjct 111439 TGGGCTATTCGGTGGATCCAGGACAAGAACTCATCTTTTGCCCAGCGTCTGGTTGCTTTC 111498
Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953
||||| || ||||| || || ||||| ||| | || ||| ||||||||||||||||| ||
Sbjct 111499 GCTGCCGTTGAGGGTATTTTCTTCAGTGGTGCTTTCGCGTCCATCTTCTGGCTCAAGAAG 111558
Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013
|| |||||| || || || |||||||||||||| | || ||||| ||
Sbjct 111559 CGTGGTCTCATGCCTGGCTTGACATTCTCCAACGAGCTCATTTCTCGTGATGAGGGCCTG 111618
Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAG-A 26072
|||| || || ||||| || |||||| |||||| || | | |||| |
Sbjct 111619 CACACCGACTTCGCCTGTCT--CCTACAC-TCTCACTTGAAGAACCGAGC-CAGCAAGCA 111674
Query 26073 GA-CCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNN 26131
|| | || || ||||||| || ||||| | |||||| ||||||| |
Sbjct 111675 GATCATTCGTGAG-ATCATCACCGACGCTGTCAACATCGAGCAGGAGTTCCTGACCGAGG 111733
Query 26132 NNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATTGAGTAT 26190
||||||||||| | || ||||||| |||||||| |||| |
Sbjct 111734 CACTGCCTTGCGCTCTTCTGGGCATGAAC-TCGGACCTCATGAAGCAATACATCGAGTTT 111792
Query 26191 GTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTAC-AGTACGCCTAACC 26248
|| ||||||| ||| | |||| || || || || | | ||| ||| ||| ||||
Sbjct 111793 GTTGCCGACCGTCTTCTTGTGGCA-CTTGGCAACGAGAAGATTTACAAGTCTGCC-AACC 111850
Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308
| |||||||| ||||| ||||| || | | || |||||||||||||| || ||| | |
Sbjct 111851 CCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 111910
Query 26309 TCGGCGACTATCA 26321
| || || || ||
Sbjct 111911 TTGGTGATTACCA 111923
Score = 86.0 bits (94), Expect = 1e-11
Identities = 174/258 (67%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| |||||| ||||| || |||||||||
Sbjct 111025 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAAATTGATCTG 111084
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTC---TATCCAAAGACGAGCAGCATTTTCTCAAG 25593
||||||| ||| |||| || || | | ||||||||| ||| ||
Sbjct 111085 TCCAAGGATCAACACGACTGGAACAATCGTCTGACTTCCGACGAGCAGTTCTTTATCTCT 111144
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | | || |||||||| ||||||||||| || || || || || || ||| ||
Sbjct 111145 CACATCCTTGCCTTCTTTGCCGCCTCTGATGGCATCGTCAATGAAAACTTGGTTGAGCGA 111204
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | | || || ||| | ||||| || ||||| ||||| || || ||
Sbjct 111205 TTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTATGGTTTTCAAATCATGATG 111264
Query 25714 GAAAATGTGCACTCTGAG 25731
||||| | |||||||||
Sbjct 111265 GAAAACATCCACTCTGAG 111282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928842605604160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |