Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq68 105 8e-18 >seq68 Length=881270 Score = 105 bits (116), Expect = 8e-18 Identities = 174/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 ||||| || | ||| || || | || ||||| | ||||| ||||| ||||| || || Sbjct 42952 AGTCCCTCGGGACCGTGGTAAACGGCGTAGAAGGCCGACATGTTTGCCAGCAGGGCCTGG 43011 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || ||||||||||| ||||| || || || | || || |||||||| | || || || Sbjct 43012 GCGGTGCAGATGTTGCTGGTGGCCTTTTCACGTCGGATGTGCTGCTCGCGGGTCTGCAGC 43071 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || | | ||| | |||||| || || ||| || || | |||||| || Sbjct 43072 GCAAGACGAAGCGCACGCTTGCCTAGGCGATCTTTCGACACGCCGACGAGTCTGCCGGGG 43131 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 ||||| | ||| ||||| || || || || ||||| ||||| || || || ||| | ||| Sbjct 43132 ATCTTGCGCTTGTACTTTTCAGTGGTCGCGAAGAAGGCAGCGTGGGGTCCGCCGAAGCCC 43191 Query 139500 ATAGGAATACC 139510 | |||| ||| Sbjct 43192 AGGGGAACACC 43202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997032116280