Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq134 150 2e-30
seq157 140 4e-27
seq101 136 5e-26
seq125 93.3 5e-13
seq90 87.8 2e-11
seq168 86.0 8e-11
seq68 86.0 8e-11
>seq134
Length=152861
Score = 150 bits (166), Expect = 2e-30
Identities = 268/393 (68%), Gaps = 15/393 (4%)
Strand=Plus/Minus
Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121
|| |||||||||||| || || |||| ||| ||||| |||||||| || | || || ||
Sbjct 57101 GCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATT 57042
Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181
||| ||||||||| || || | ||| | ||||| ||| || | |||| || |
Sbjct 57041 GGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAG 56982
Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241
|||||||| || ||| ||||||||| | || || ||||| ||||||||||| ||
Sbjct 56981 ACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACC 56922
Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301
||||| ||| |||||||||| || || ||||| || || || || || | ||
Sbjct 56921 GTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGT 56862
Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTA 1630361
|| || ||||| || || || | || ||||||| || | |||||| || |||
Sbjct 56861 ACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTA 56802
Query 1630362 GGTGGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGC 1630421
||| | || || ||| || | |||| || || || ||||| ||
Sbjct 56801 GGTCTCCAGGACACGC------------TCGATGTCGTCA---CCCCAGATGCCGACAGC 56757
Query 1630422 GACGCGCATGAGCATGTACTGGGGCCGCTCGAC 1630454
||| ||||||| ||||| ||| || ||||| ||
Sbjct 56756 GACACGCATGATCATGTGCTGAGGTCGCTCAAC 56724
>seq157
Length=1392180
Score = 140 bits (154), Expect = 4e-27
Identities = 94/105 (90%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 1592190 CCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGA 1592249
|||||||||||||||||||||| || |||||| |||| |||||| | || ||||||||||
Sbjct 532309 CCAACTACCTCGACATCAAGCCCCTTCTCGATGTTGGTTGCAAGACCGTCGCCAACATGA 532368
Query 1592250 TCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||||| |||||||||||||| ||||| || |||||||
Sbjct 532369 TCAAGGGCAAGTCTCCCGAGGAGATCCGAAAGACGTTCAACATCA 532413
>seq101
Length=835023
Score = 136 bits (150), Expect = 5e-26
Identities = 179/246 (73%), Gaps = 4/246 (2%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 111929 GCCTTCTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATG 111870
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | |||||| ||| ||| || || | | |
Sbjct 111869 TTCTCCATGAAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTGCCAAGTGCCACA 111810
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC--GA 868868
|| || |||||||| |||||||||||||| || ||||||| | | ||||||||| ||
Sbjct 111809 AGAAGACGGTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGA 111750
Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928
|||||| | ||||| | |||| ||| ||||| | |||||| | ||| || ||| ||
Sbjct 111749 AGAGCGCAA--GGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGA 111692
Query 868929 TGATCT 868934
||||||
Sbjct 111691 TGATCT 111686
>seq125
Length=278511
Score = 93.3 bits (102), Expect = 5e-13
Identities = 117/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 19034 CAAGCGCCAAGAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGC 19093
|||| | ||| |||||||| || ||||| | || || ||| |||||| || || ||
Sbjct 43574 CAAGGCCAAAGGAGACAGCATTGGAGGCACCATAACATGTGTGGTTCGCAATGTCCCAGC 43515
Query 19094 AGGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTC 19153
|| |||| ||||| ||||| ||||| | || || ||| || |||||||| |||
Sbjct 43514 CGGGATCGGAGAGCCATGCTTCGACAAACTTGAAGCAATGCTAGCTCACGCCATTCTGAG 43455
Query 19154 GATCCCGGCCACCAAGGGATTCGAGATTGGCAGCGGGTTTG 19194
||||| ||||||||||| ||||| |||| |||||||
Sbjct 43454 CATCCCCGCCACCAAGGGCGTCGAGTTTGGATCGGGGTTTG 43414
>seq90
Length=851906
Score = 87.8 bits (96), Expect = 2e-11
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 18358 CCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCG 18417
||||| ||||| |||||||||| || ||| | | ||||| || | ||||| || ||
Sbjct 174046 CCGCGCCCCTCCCACGCCGACTGGACTTACCTTGAGAAGTATGGTACTAAGGCCTCCTCT 173987
Query 18418 GGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCC 18477
||||| |||||| ||||| ||||| | ||||||||||||||||| || |||
Sbjct 173986 GGCGGCGGCCGGAGCAGCGCCCGTGAGACTATTGCCCGCGTCGCCGCCGGCGCTGTTGCC 173927
Query 18478 GAGAAATGGCT 18488
||||| |||||
Sbjct 173926 GAGAAGTGGCT 173916
>seq168
Length=1342871
Score = 86.0 bits (94), Expect = 8e-11
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 450778 CGCACCGGCCGCGTTTGGCCGATGCGGTGCACGCGGTCGACGGCCTGCGCCTCGGCAAAC 450837
||||| |||||| ||||||||| || ||||||||||| ||||| ||||||||||| |
Sbjct 1269901 CGCACTGGCCGCTTTTGGCCGAGACGATGCACGCGGTCCACGGCTTGCGCCTCGGCTGCC 1269960
Query 450838 GGATTGTAGTGCGCGTCCATGA 450859
|| ||||| |||| |||||||
Sbjct 1269961 GGGTTGTACTGCGGCTCCATGA 1269982
>seq68
Length=881270
Score = 86.0 bits (94), Expect = 8e-11
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025
||||| |||||||||| || ||| |||||||| ||||| || || || ||||| ||||
Sbjct 91715 GTCGATGTCGGGGTCGTTGATCAGTCCCTTCCAGCCGACCGTGGTTCGGGGCTTCTCGAG 91774
Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTC 1727067
|||||||||||||| || || ||| || || || || |||
Sbjct 91775 GTAGGCGCGCATGACAACACAGAGCTCGCCGGAGAGCTTGTC 91816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107123689774913
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |