Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq134 125 6e-24
seq1 98.7 9e-16
>seq134
Length=152861
Score = 125 bits (138), Expect = 6e-24
Identities = 463/716 (65%), Gaps = 17/716 (2%)
Strand=Plus/Minus
Query 139301 GCTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGAC 139360
|||| ||||| ||||| || | ||||| ||||||||| |||| ||| || | |
Sbjct 57360 GCTCATACTTCTCGTACAGCTTCTCGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGC 57301
Query 139361 ACTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGAT 139420
||| | || |||||||| | ||| |||||||| || ||| ||| ||||||||||||
Sbjct 57300 ACTCATTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGAT 57241
Query 139421 CCGGAATCCACAAAGCGAACAGCAAAT--CGCGCGCCTTCTTATCTTCCGAACCCATGTT 139478
| || ||||||| || || | ||| | || |||| || |||||| || |||
Sbjct 57240 CGGGGATCCACAGGGCCAAGAACAAGTCACGAGCGCGGGCT--TCTTCCTTGCCGTGGTT 57183
Query 139479 ACGTTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCAT 139538
|| | | ||| ||||||||||| |||||||| || || || || ||||| |
Sbjct 57182 CTTGCGCAGATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAA 57123
Query 139539 TGCGCC---TTTCCGTTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCG 139595
|| || | | ||||| || || ||||||| ||| ||| || ||||| || ||
Sbjct 57122 AGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACG 57063
Query 139596 CAACATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATGGGACTGTTGCGA 139653
| ||| || | ||| | | || |||||||| | ||| ||| | | |
Sbjct 57062 GAGCATAGGAATGACACCATTGGAGGTGCCGTTGGTAC--CGGCAATGTAAGAGCCGGTG 57005
Query 139654 GCTCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA 139713
|| |||| || || |||| ||||| || || | | ||||| || | | |||
Sbjct 57004 GCACGGATTCGGTGCACGTTGAGACCGATGCCTCCTGCCATCTTGGAGATCATGGCACAA 56945
Query 139714 -TCGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCA 139772
|| | | || ||||| ||||| |||||||| |||| ||| ||||| |||||
Sbjct 56944 GTCTTG-AGGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCA 56886
Query 139773 TGACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA 139832
|| || || || || | || || || ||||| || || ||||| |||||
Sbjct 56885 GGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAA 56826
Query 139833 CATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGAT 139892
|| | | ||||| | | ||| || || | | | | | | || || || |||
Sbjct 56825 CAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGAT 56766
Query 139893 ACCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttt 139952
||||||| ||| ||||| | ||| || || || || | | | ||| ||||| ||
Sbjct 56765 GCCGACAGCGACACGCATGATCATGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCTT 56706
Query 139953 tttCAGATA--ACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
|| || | || |||||| |||||| |||| ||||| |||||||||||
Sbjct 56705 CAGGAGGTAGGATCG--CTCTAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAATC 56652
>seq1
Length=5508434
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || || ||||| ||||| || ||| | |
Sbjct 3986750 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACGATTACTCTCGAGGTCGAATCTTCT 3986691
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| |||||||| || || || || || || ||
Sbjct 3986690 GATACTATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCCCCAGACCAG 3986631
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || | || ||||| || || |||||||||||| | | | || ||||| |||
Sbjct 3986630 CAGCGACTTATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGTGATTACAAC 3986571
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| ||||| || ||| ||||
Sbjct 3986570 ATTCAGAAGGAGTCGACCCTTCACCTGGT 3986542
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| || || || || ||||| ||||| || |||||||||| || ||
Sbjct 3987122 AAGATCCAGGACAAGGAGGGTATCCCCCCCGACCAACAGCGCCTGATCTTTGCTGGCAAG 3987063
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| |||||| ||| | | || || || ||||| ||||||||||| || || |||
Sbjct 3987062 CAGCTTGAGGATGGCCGAACCCTCTCCGACTACAACATCCAAAAGGAATCTACCCTTCAC 3987003
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
| || | || | ||||| ||
Sbjct 3987002 CTCGTCCTCCGTCTTCGCGGTGG 3986980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449896537116920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |