Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq101 149 5e-31 seq1 98.7 8e-16 >seq101 Length=835023 Score = 149 bits (164), Expect = 5e-31 Identities = 223/317 (70%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||||||||| | || | | || | ||||||||| |||||||||||| || Sbjct 172190 TCGGTCTCCGGGTTCTTGCACTTCTTGCAGAGAACAAACTTGTTGATGAAACCATCGAGG 172249 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 |||| || | ||| |||| ||||||| |||||||| ||| | || |||| ||| | Sbjct 172250 TGGTCTTGGAGCTTGGCGGAATCGTGGGCGCCGTTGATGATCCAACGGTCGTCCTTGGGA 172309 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 |||| | || || || || |||||| | |||||||| || | ||| | | || Sbjct 172310 TCGATGTTTGTCTGAGCACCAAGCTCGAAACCGAAGTATTTGATGACGTATGCGCCAGGG 172369 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || | || | ||||| | | || |||||||| ||| |||||||||||||| || Sbjct 172370 CGAGCGAGGGAGTTGGCAACGCTGCTCAAGTTGACGACGACGGTCTTGATGCCGTTTCCT 172429 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617 || ||||| | ||||| ||||||| ||| |||||||| ||||| ||||| ||| Sbjct 172430 TTGCCTTCAATCTTGGTCTGGATGCGCTCCATCTTGTAGCGATAGAAGGCGTCGCTGACA 172489 Query 34618 TTGCGGTTAACGTTCAC 34634 | |||| ||||| || Sbjct 172490 TCGCGGCGGACGTTGAC 172506 >seq1 Length=5508434 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || ||||| || | |||||||| || ||||| |||| || || Sbjct 3986750 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACGATTACTCTCGAGGTCGAATCTTCT 3986691 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| ||| | | || || ||||||| ||||| || ||| | ||| || || Sbjct 3986690 GATACTATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCCCCAGACCAG 3986631 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||||||||| ||| ||||| ||||||||||||| | || || ||||||||| Sbjct 3986630 CAGCGACTTATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGTGATTACAAC 3986571 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| || || || || | ||| |||| Sbjct 3986570 ATTCAGAAGGAGTCGACCCTTCACCTGGT 3986542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840649045177