Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq101 149 5e-31
seq1 98.7 8e-16
>seq101
Length=835023
Score = 149 bits (164), Expect = 5e-31
Identities = 223/317 (70%), Gaps = 0/317 (0%)
Strand=Plus/Plus
Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377
|| ||||||||||| | || | | || | ||||||||| |||||||||||| ||
Sbjct 172190 TCGGTCTCCGGGTTCTTGCACTTCTTGCAGAGAACAAACTTGTTGATGAAACCATCGAGG 172249
Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437
|||| || | ||| |||| ||||||| |||||||| ||| | || |||| ||| |
Sbjct 172250 TGGTCTTGGAGCTTGGCGGAATCGTGGGCGCCGTTGATGATCCAACGGTCGTCCTTGGGA 172309
Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497
|||| | || || || || |||||| | |||||||| || | ||| | | ||
Sbjct 172310 TCGATGTTTGTCTGAGCACCAAGCTCGAAACCGAAGTATTTGATGACGTATGCGCCAGGG 172369
Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557
|| | || | ||||| | | || |||||||| ||| |||||||||||||| ||
Sbjct 172370 CGAGCGAGGGAGTTGGCAACGCTGCTCAAGTTGACGACGACGGTCTTGATGCCGTTTCCT 172429
Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617
|| ||||| | ||||| ||||||| ||| |||||||| ||||| ||||| |||
Sbjct 172430 TTGCCTTCAATCTTGGTCTGGATGCGCTCCATCTTGTAGCGATAGAAGGCGTCGCTGACA 172489
Query 34618 TTGCGGTTAACGTTCAC 34634
| |||| ||||| ||
Sbjct 172490 TCGCGGCGGACGTTGAC 172506
>seq1
Length=5508434
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| || | |||||||| || ||||| |||| || ||
Sbjct 3986750 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACGATTACTCTCGAGGTCGAATCTTCT 3986691
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|||||| ||| | | || || ||||||| ||||| || ||| | ||| || ||
Sbjct 3986690 GATACTATCGACAATGTCAAGTCGAAGATTCAAGACAAGGAGGGCATCCCCCCAGACCAG 3986631
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| ||||||||| ||| ||||| ||||||||||||| | || || |||||||||
Sbjct 3986630 CAGCGACTTATTTTTGCTGGTAAGCAGCTGGAGGATGGTCGCACCCTGAGTGATTACAAC 3986571
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481
||||| || || || || | ||| ||||
Sbjct 3986570 ATTCAGAAGGAGTCGACCCTTCACCTGGT 3986542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412840649045177
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |