Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq157 136 6e-26
seq101 125 1e-22
seq135 98.7 2e-14
seq154 95.1 2e-13
>seq157
Length=1392180
Score = 136 bits (150), Expect = 6e-26
Identities = 93/105 (89%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
||||||||||||||||||||||||| |||||| | || ||||||||||| |||||| | |
Sbjct 532309 CCAACTACCTCGACATCAAGCCCCTTCTCGATGTTGGTTGCAAGACCGTCGCCAACATGA 532368
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
||||||||||||| |||||||| ||||| ||||| || |||||||
Sbjct 532369 TCAAGGGCAAGTCTCCCGAGGAGATCCGAAAGACGTTCAACATCA 532413
>seq101
Length=835023
Score = 125 bits (138), Expect = 1e-22
Identities = 171/237 (72%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| || || || ||| |||||| |||||||||||||| | || ||||| ||||||
Sbjct 111920 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 111861
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027
| ||| |||||||| | | ||| ||||||| || || | | |||| || |||
Sbjct 111860 AAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTGCCAAGTGCCACAAGAAGACGG 111801
Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCC--GATGAGCGCCA 794085
||||| || || || ||||| || ||||||| | | ||||||||| || |||||| |
Sbjct 111800 TCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAGCGCAA 111741
Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCT 794142
||||| | |||| | | ||||| | |||||| | ||| || ||| |||||||||
Sbjct 111740 --GGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATCT 111686
>seq135
Length=1646924
Score = 98.7 bits (108), Expect = 2e-14
Identities = 167/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 2019198 CCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCC 2019257
|| || || || || ||| ||||||||||||| || |||||| || | || || | ||
Sbjct 1122019 CCCCCGGGGCGACAAAAGTTGATCATCCTCGACGAAGCCGACAGCATGACATCTGGCGCG 1122078
Query 2019258 CAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCC 2019317
||||| ||||||||| ||| ||||||| || |||| || || | || || | |||
Sbjct 1122079 CAGCAAGCCCTCCGACGGACGATGGAAATTTATTCCAATACCACCAGATTCGCATTCGCC 1122138
Query 2019318 TGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTT 2019377
|||||| ||| | ||||||| || | || | ||||||||| |||| | |
Sbjct 1122139 TGCAACCAGTCCAACAAAATCATCGAGCCCTTACAATCGAGATGCGCCATCCTGCGATAT 1122198
Query 2019378 GCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAG 2019437
|| || ||||||||||| | | ||| ||| |||| ||||| || ||||||
Sbjct 1122199 GCAAAGCTGACCGACGCCCAAGTGGTGAAGCGGTTGCTTCAGATCATCGAAGCGGAAAAG 1122258
Query 2019438 GT 2019439
||
Sbjct 1122259 GT 1122260
>seq154
Length=27462
Score = 95.1 bits (104), Expect = 2e-13
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||||||||| || ||||| ||| |||| || || ||| | |
Sbjct 8484 GTACTTGGTGACGGCCTTGGTACCCTCGGACACGGCATGCTTGGCAAGCTCACCGGGGAG 8543
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||| ||||| || | |||||| ||||| ||||
Sbjct 8544 GATGAGGCGGACAGAGGTCTGAATCTCTCGGG 8575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916226295207971
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |