Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 1e-14
>seq2
Length=1180426
Score = 95.1 bits (104), Expect = 1e-14
Identities = 219/327 (67%), Gaps = 11/327 (3%)
Strand=Plus/Plus
Query 19426 CCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAA 19485
|||||||| || | || ||||| ||| | | || || || || ||| |||||||||
Sbjct 225167 CCTCCCAAGGTTATCAACGGTCCCGAAGTGCTCAACAAGTACGTTGGTGCATCGGAAGAG 225226
Query 19486 AATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AG 19544
|| | ||| |||||||| || || || |||| | | || | |||| | | ||
Sbjct 225227 AACATCCGAAAGTTGTTTGCAGATGCCGA-GAAGGAGTACAAGGAGAAGGGGGATGAGAG 225285
Query 19545 TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG 19604
| ||| ||||| || || | ||||| |||||||| | || || ||| ||||||| ||
Sbjct 225286 TAGTTTACACATCATCATCTTCGATGAGTTGGACGCTGTGTGCAAACAACGAGGTTCAGG 225345
Query 19605 ---TGTA------AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGA 19655
|| | | |||||| ||||| || || ||||| || || || ||| | ||
Sbjct 225346 CGCTGGAGGCGGCACTGGAGTCGGTGACAGCGTGGTGAATCAGCTTCTATCCAAACTTGA 225405
Query 19656 CGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAAT 19715
||||| |||| || || |||||| | | || || ||||| || || ||| | ||
Sbjct 225406 TGGTGTGGACCAGCTCAACAATATTCTTTTGATCGGAATGACCAACCGAAAGGACATGAT 225465
Query 19716 AGACAGCGCCTTATTACGACCCGGTCG 19742
||| || | || |||||||||||
Sbjct 225466 CGACGATGCGCTGTTGCGACCCGGTCG 225492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397455084484945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |