Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq134 91.5 5e-13 seq101 84.2 7e-11 >seq134 Length=152861 Score = 91.5 bits (100), Expect = 5e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 || || ||| ||||||| ||||||||| ||||| |||||||| || || ||| ||| Sbjct 57051 ATTCCTATGCTCCGTGTCTTCAACAACACTGCTCGATACGTCGACCAGGGCGGCAACAAG 57110 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATT 255085 || || || || ||| |||| ||||| ||||| |||||||||||| || Sbjct 57111 CGACCCGGTGCTTTCGCCATTTACCTTGAGCCCTGGCACGCCGACGTT 57158 >seq101 Length=835023 Score = 84.2 bits (92), Expect = 7e-11 Identities = 116/161 (72%), Gaps = 1/161 (1%) Strand=Plus/Plus Query 443707 AGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCC 443766 |||| || || ||||| |||| || || || | || || || || ||||| || ||| Sbjct 111482 AGCGTCTGGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCAGTGGT-GCTTTCGCGTCC 111540 Query 443767 ATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATC 443826 ||||||||| | || |||||||| || |||| || |||| || ||||| || || Sbjct 111541 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCTTGACATTCTCCAACGAGCTCATT 111600 Query 443827 AGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 ||| || ||||| |||| ||||||||||||||| || Sbjct 111601 TCTCGTGATGAGGGCCTGCACACCGACTTCGCCTGTCTCCT 111641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588332153745105