Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq134 219 5e-52
seq101 100 4e-16
>seq134
Length=152861
Score = 219 bits (242), Expect = 5e-52
Identities = 1132/1786 (63%), Gaps = 55/1786 (3%)
Strand=Plus/Minus
Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896
|||||||||||||| || |||||||| || |||||||| | | ||||| ||
Sbjct 58456 CGGAGGTAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTG 58397
Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956
| |||| | || || || |||| || ||| | || || ||||||||||||
Sbjct 58396 ATCTTGCCCATTGTGGGGTCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAG 58337
Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCC 118014
|| ||||| || | ||| | | || | | | || | |||||||| |||
Sbjct 58336 GCACCACGATCGGCGGACATTTGGAGGACCTGG--CGTTGGGAAATCTCCCACACCGTCT 58279
Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCT 118074
||||||| |||||| || || || || | ||| || ||||| || || | |
Sbjct 58278 TGTAGAGCGACTTAATGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAG 58219
Query 118075 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 118134
| ||| | | |||||| | | ||||| | || || | | || |||| || ||
Sbjct 58218 AAATGATGCGGTTCTTCATGGCATCCGACCACAAGCCCATATCTACCAGGTCCTTCAAGA 58159
Query 118135 GATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCG 118194
| || ||||| |||||||| || ||| || | | | ||||| || | |
Sbjct 58158 GCCAGGGGTTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGG 58099
Query 118195 TGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGG 118254
| || ||||| ||||| || || || |||| ||| || | || ||| || ||||| |
Sbjct 58098 TATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAG 58039
Query 118255 GTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCC 118314
| || | || | |||||| || | ||| | ||| ||| | || || | ||||
Sbjct 58038 GGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGTCTCCC 57979
Query 118315 AGTCGTA---GTTG-AGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGG 118370
|||| | || | || | || | | | |||||||||||||||||||||||| |
Sbjct 57978 AGTCCCAAAGGTCGGAG----GGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCA 57923
Query 118371 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT---CGGAG 118427
|| ||||| || |||| || | || || ||||| ||| || | || | |||
Sbjct 57922 GATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTGCACCGAG 57863
Query 118428 CTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCC 118487
|| | | || ||||| || || || ||||| || | |||| | |||
Sbjct 57862 GCCGTC---AAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCC 57806
Query 118488 TCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCG 118547
||| ||| || || | | || | || |||| || ||||| |||||||||
Sbjct 57805 TCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCG 57746
Query 118548 AGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACG---GGATAAAAA 118604
| ||||| || || || | ||| || || || || ||| | | || ||
Sbjct 57745 ACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGC---CTCGATGATGGGGTAGTGG 57689
Query 118605 TTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTT 118664
|| ||||||| | | || | || | |||||||| ||||| || || |||||
Sbjct 57688 TTGACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTC 57629
Query 118665 TCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGATTGACGC 118720
| | | || | | || ||| | | | || || ||||||| || | ||| ||
Sbjct 57628 TGGAAGTCGTAGCAGCC---CTCGTTGTAGTCA-ACAAAGGAAGGCAGAGCCAATGATGC 57573
Query 118721 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTT 118780
||||| || |||| | |||||| | || |||||| || || || ||||| | |||
Sbjct 57572 GAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTT 57513
Query 118781 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTA 118840
||||| ||||||||||| |||||| || || || ||| || ||||||||
Sbjct 57512 GGAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTA 57453
Query 118841 AAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGG 118899
|||||| | || | || || || || || | || | || || | ||| | | || |
Sbjct 57452 GAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGCTTCTG 57393
Query 118900 CAGCTGGCACAGTGGCGTTGG---CTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTT 118956
|| || ||| ||| || || | | ||| ||||| ||| || |
Sbjct 57392 GGCCTT---CA-TGGTCTTGCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAGCTTCT 57337
Query 118957 CAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACC 119016
| ||||| ||||| | || | ||||| || || || ||||| | ||||| ||
Sbjct 57336 CGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCC 57277
Query 119017 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 119076
| | || || ||| || ||||||||||| || || |||||||| || ||| |||| |
Sbjct 57276 AGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACA 57217
Query 119077 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 119136
|| ||| ||| |||||||| | || || || |||| ||||| || || | |
Sbjct 57216 AGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAA 57157
Query 119137 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC------CTTACGACGACCAG 119190
|| |||||||| || || ||||| | |||| | || ||| | | ||
Sbjct 57156 CGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTT--GTTG-CCGC 57100
Query 119191 CCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGG 119250
|||||| || || | |||||| ||| || ||||| ||||| ||||||| ||||| ||
Sbjct 57099 CCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGG 57040
Query 119251 ATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATAC 119310
| ||| || || || ||| ||| |||| | || ||| | || | ||
Sbjct 57039 AGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGAC 56980
Query 119311 CAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCAT 119370
| || || |||||| ||| ||||| || || | |||| || ||||||| || |
Sbjct 56979 CGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGT 56920
Query 119371 CGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTAC 119430
|||| ||| |||| | | | ||||||||| |||| |||||| || ||||
Sbjct 56919 CGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTAC 56860
Query 119431 CAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG--GGACATCTTGTCGTA 119488
| || ||||| || ||||||| ||||| |||||| |||| |||||| || |||
Sbjct 56859 CCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAG--CTTGCTGGACATGAGGTTGTA 56802
Query 119489 GGTCTCCAAGAC-GGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACA 119547
|||||||| ||| || | ||||| || || || |||| | ||| ||||| | ||
Sbjct 56801 GGTCTCCAGGACACGCTCG-ATGTCGTCACCCCAGATGCCGACAGCGACACGCATGATCA 56743
Query 119548 TGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA 119593
||| || ||| || | | | ||||||| | || |||||||
Sbjct 56742 TGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTA 56697
>seq101
Length=835023
Score = 100 bits (110), Expect = 4e-16
Identities = 300/456 (66%), Gaps = 14/456 (3%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || ||||| ||||||||||||||||| ||||| ||| | | | ||| ||||||||
Sbjct 111920 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 111861
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| || || |||| | || | |||| || |||||
Sbjct 111860 AAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTG-CCAAGTGCCACAAGAAGACG 111802
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
|| | || |||| ||||| | ||| || |||||||| || | || ||
Sbjct 111801 GTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAGCGCA 111742
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
|| || || || | |||| ||| ||| |||| ||||| || | ||| | |
Sbjct 111741 AGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATCTCACG 111682
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAA-----AGTCTTGAAGAGTTCCACGGCAAAC 130021
|||| ||| | ||| | || || ||| ||| | | ||| || ||| ||
Sbjct 111681 AATGATCTGCTTGCTGGCTCGGTTCTTCAAGTGAGAGTGTAGGAGA----CA-GGCGAAG 111627
Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081
|| ||| || ||||| ||||| || ||||| || || ||||| || || ||||||
Sbjct 111626 TCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCAGGCATG 111567
Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCG-CACAAAATGAGCCAGAGAAGAAGATCCCCTC 130140
||||| |||||||| | |||||| || | | | ||| | ||| |||||| || |||||
Sbjct 111566 AGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAA-GCACCACTGAAGAAAATACCCTC 111508
Query 130141 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 130176
|| ||||| |||| ||||||| ||||| ||
Sbjct 111507 AACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGA 111472
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618433738946840
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