Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq124 84.2 2e-11 >seq124 Length=2242402 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/228 (70%), Gaps = 6/228 (3%) Strand=Plus/Minus Query 30232 GTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 30291 |||||| || || || |||| |||||| |||||||| || || || ||||| || |||| Sbjct 1137281 GTACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAAACAGGACCAAGGTCGCCGACTTC 1137222 Query 30292 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 30351 | ||| | || ||||| | || || | || ||||| ||||||| ||||| Sbjct 1137221 GCGATGCGTTAGACCGAGGTTGTCGAGGAACTCACGAGAGCCGTTTCCGTCCCAAATCTT 1137162 Query 30352 TACCCC--CTTCTCAGAGAGCTCTTTGGAGTTTGTGG-ACCCTCTGACGAACCACAGCAG 30408 | || | || | ||| | |||||| || ||| |||||| || |||||| || || Sbjct 1137161 GATGCCGGCATCGCTGAGGG-TCTTTG-AGGAAGTGTTACCCTC-GATGAACCAGAGAAG 1137105 Query 30409 CTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30456 ||| | | |||||| |||||| | |||||| ||||||||||| Sbjct 1137104 CTCGACGATGACGGCTCGTGTAAAGACGCGCTTGGTGGTGAGGAGGGG 1137057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406309464089388