Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq2 131 4e-25
seq1 125 2e-23
seq124 105 2e-17
>seq2
Length=1180426
Score = 131 bits (144), Expect = 4e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || || |||||||| ||| || ||||||||||| ||| | ||||
Sbjct 395794 GAGGCGGAGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCG 395735
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|||||||| || || |||||||||||||| | ||||||||||| | ||||| ||
Sbjct 395734 GCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTC 395675
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || || ||||| | || | |||| ||| ||| || ||||| ||
Sbjct 395674 CTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCAAGGGT 395615
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| || || |||||||| ||||| ||||||| |||||| || ||
Sbjct 395614 GATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTGCC 395570
>seq1
Length=5508434
Score = 125 bits (138), Expect = 2e-23
Identities = 161/220 (73%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
|||| ||| ||||| |||||||| ||||| || ||||||||||| |||| || || |
Sbjct 3986761 AGTCGGAGAACAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGG 3986820
Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
||||| || || ||||| ||||||||||| || | ||||||||| | | ||| || |
Sbjct 3986821 CCATCCTCAAGCTGCTTT--CCGGCGAAGATGAGTCGCTGCTGGTCTGGGGGGATACCCT 3986878
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
|||| || ||||| || |||||| | || | |||| || ||| || ||||| |
Sbjct 3986879 CCTTATCCTGAATCTTCGACTTGACATTGTCGATCGTGTCGGATGACTCCACCTCAAGGG 3986938
Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| || || || | ||||| || |||| |||||
Sbjct 3986939 TGATAGTCTTACCGGTCAAGGTCTTGACAAAGATTTGCAT 3986978
Score = 107 bits (118), Expect = 4e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| || || ||||| || ||||| || || ||||||||||| | || |
Sbjct 3986532 GAGACGGAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCG 3986591
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || || || ||||| | ||||||||| | | ||| || ||
Sbjct 3986592 ACCATCCTCCAGCTGCTTACCAGCAAAAATAAGTCGCTGCTGGTCTGGGGGGATGCCCTC 3986651
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| |||||||| || |||||| | || | | || ||| || || || |||||
Sbjct 3986652 CTTGTCTTGAATCTTCGACTTGACATTGTCGATAGTATCAGAAGATTCGACCTCGAGAGT 3986711
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || ||||| ||||| ||||| ||||| | ||||||
Sbjct 3986712 AATCGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 3986750
Score = 100 bits (110), Expect = 7e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| || ||||| ||||| || |||||||||||||| |||| | |||| |||||
Sbjct 3986994 GAGGACGAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTTCGGCCATC 3987053
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || ||||| || | ||| ||||| | | ||| || ||||| ||
Sbjct 3987054 CTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTC 3987113
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || || ||| | || | | | || ||| ||| || || || || || ||
Sbjct 3987114 CTGGATCTTCGACTTCACATTGTCGATGGTATCCGAAGACTCGACCTCGAGGGTGATGGT 3987173
Query 152072 TTTGCCCGTGAGAGTCTTCACGA 152094
||||| ||||| ||||| ||||
Sbjct 3987174 CTTGCCAGTGAGGGTCTTGACGA 3987196
Score = 89.7 bits (98), Expect = 1e-12
Identities = 139/197 (71%), Gaps = 4/197 (2%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||| || || || || ||||| || ||||||||||| |||| | || |
Sbjct 3987272 GAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 3987331
Query 151946 CCCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
|| || || || ||||| || ||||||||||| | |||||| |||| | ||| ||
Sbjct 3987332 GCCGTCCTCGAGCTGCTTT--CCAGCGAAGATAAGGCGCTGCTGATCCGGAGGGATGCCC 3987389
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || || || || || || | || | | |||| || ||| || ||||||
Sbjct 3987390 TCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGA 3987449
Query 152064 GTAATAGTTTTGCCCGT 152080
|| || || || |||||
Sbjct 3987450 GTGATGGTCTTTCCCGT 3987466
>seq124
Length=2242402
Score = 105 bits (116), Expect = 2e-17
Identities = 133/181 (73%), Gaps = 4/181 (2%)
Strand=Plus/Plus
Query 151917 TTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCCCGGCGAAGA 151974
|| ||||||||||| |||| | ||| | ||||| || || ||||| ||||||||||
Sbjct 2075688 TTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCCTCAAGCTGCTTT--CCGGCGAAGA 2075745
Query 151975 TAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGTCT 152034
| | | |||||| |||| | ||||| ||||| || || || || |||||| | |
Sbjct 2075746 TCAATCGCTGCTGATCCGGGGGAATTCCCTCCTTATCCTGGATCTTGGACTTGACATTGT 2075805
Query 152035 CTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
| | | |||| || ||| || ||||| || || || ||||||||||| ||||||||||
Sbjct 2075806 CAATGGTGTCCGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGA 2075865
Query 152095 A 152095
|
Sbjct 2075866 A 2075866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153818005950819
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |