Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq151 105 7e-18
>seq151
Length=1813609
Score = 105 bits (116), Expect = 7e-18
Identities = 196/287 (68%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531
|| || |||||||| || || ||| | || ||||| ||||| || || || |||
Sbjct 1086006 ATGTAGGTATCAATGAGCAATGAGTAGGTCTCAGAGTGGATGTTTTCCATCATGATTTGA 1085947
Query 16532 AATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGG 16591
|| |||||||||||||||||||| | || || || || || ||||| || ||| |
Sbjct 1085946 AAACCATAGAAGCATCGAGCCTCAGGGATCTGGACCTCGCCGCTGAATCGCTCAACCAAG 1085887
Query 16592 TTCTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATAT 16651
|| ||||| ||||| || ||| || ||||| || || | ||||| || || |
Sbjct 1085886 TTTTCATTGACGATGCCATCAGAGGCGGCAAAGAAGGCAAGGATGTGAGAGATAAAGAAC 1085827
Query 16652 TTTTCGTCAGATGT---AAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCT 16708
| ||||| || || | || | | ||| || | | ||| ||||| | ||| | |||
Sbjct 1085826 TGCTCGTCGGAAGTCAGACGATTGTTCCAGTCGTGTTGATCCTTGGACAGATCAATTTCC 1085767
Query 16709 TCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755
|| | ||||| ||| ||| | ||||| || ||||||| ||| ||
Sbjct 1085766 TCGGCAGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 1085720
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511413300459040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |