Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq85 156 5e-33
>seq85
Length=3693789
Score = 156 bits (172), Expect = 5e-33
Identities = 507/786 (65%), Gaps = 61/786 (8%)
Strand=Plus/Minus
Query 145535 ATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGT 145594
|||| || | ||||| ||| | || | | |||||||| |||||||| | ||||||
Sbjct 2592552 ATTATACAGACATCTTCATCGCAATTGTCTTGTGGGGGTCGTAGCCCTTGATACCAAAGT 2592493
Query 145595 CCTCCGCCCTGAAGTCATCTATGT--CCTCCACCCGC-CTCAGGATCCTGAGC-CTGGGA 145650
|||| | | |||| ||| ||||| | | | | |||| ||| |||| |
Sbjct 2592492 CCTCTAATTTCCATCCATCAATGCTACCTCCCTTCTCGCGCGAGATCTCGAGTTCTGGAA 2592433
Query 145651 AAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGAC 145709
| ||| | ||||| | || ||||| | || || | || ||||||| |||||| ||
Sbjct 2592432 ACTGGC--GAGGCTCACGTTCCAGCTGAATGTTGAGCGCGTCGACGTGGTCGAGGTACAC 2592375
Query 145710 GTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGAC 145769
|| ||||| |||| ||||||| | | | || ||| | | | || ||| || |
Sbjct 2592374 ATGGGCGTCTCCCATGACGTGGGTAAGGCTACCAGGCACTAAATCACAGACGTGCGCAAG 2592315
Query 145770 CATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCC 145829
||||| ||||| | | |||||||| || ||||||||||| || || |||||||| |
Sbjct 2592314 CATGTGAGTCAGTAACGCATAGCTGGCAATATTGAAGGGCACGCCGAGGCCCATGTCGCA 2592255
Query 145830 CGAGCGCTGGTACAGCTGGC-----AGGAGAGC-----------------------TCCC 145861
|| || ||||||||||||| ||| | | || |
Sbjct 2592254 GGACCGTTGGTACAGCTGGCAATGCAGGTGGCCCTGCGGCTTAGGCTCGTCCTCGGTCTC 2592195
Query 145862 CGCC--------------------CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGG 145901
||| || || |||||||| | | || || |||||
Sbjct 2592194 TGCCTCGCGTTTTTGGCGCGGGTACGAGACATAGAACTGCGCGAACATATGACACGGCGG 2592135
Query 145902 CAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-T 145960
||| |||| | | ||||| || ||||||||||| || |||| ||| | | | || |
Sbjct 2592134 CAGCACCATCTTGCGGAGGTCGGCAGGGTTCCAGGCCGTAAGGATGAGACGGC-GATCGT 2592076
Query 145961 CGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGT 146020
|||||| || | || || || || || |||||| ||||| || || ||
Sbjct 2592075 GGGGGTTTGTCCGCAGCTTGTGGATGAGTTCGGCGATCTGGTCGACGCCTTGTCCTGTGT 2592016
Query 146021 AATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGG 146080
| ||||| |||||||| |||||| |||| || ||||||| |||||| |||||||| || |
Sbjct 2592015 AGTCTGTATTGGAGTCGACGTACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAAACAG 2591956
Query 146081 GCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACC 146140
| || ||||| ||| || | ||| || ||| | ||||||| || || || |
Sbjct 2591955 GACCAAGGTCGCCGACTTCGCGATGCGTTAGACCGAGGTTGTCGAGGAACTCACGAGAGC 2591896
Query 146141 CGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCC 146198
|||| ||||||| ||||||| ||| | |||| ||| | || || ||| ||| ||
Sbjct 2591895 CGTTTCCGTCCCAAATCTTGATGCCGGCATCGCTGAG-GGTC-TTTGAGGAAGTGTTACC 2591838
Query 146199 CCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAG 146258
| |||||||||||| ||||| ||| ||| | | ||||| | ||||||||| ||
Sbjct 2591837 CTCGATGAACCAGAGAAGCTCGACGATGACGGCTCGTGTAAAGACGCGCTTGGTGGTGAG 2591778
Query 146259 CAGGGG 146264
|||||
Sbjct 2591777 GAGGGG 2591772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590075531334880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |