Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq85 156 5e-33 >seq85 Length=3693789 Score = 156 bits (172), Expect = 5e-33 Identities = 507/786 (65%), Gaps = 61/786 (8%) Strand=Plus/Minus Query 145535 ATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGT 145594 |||| || | ||||| ||| | || | | |||||||| |||||||| | |||||| Sbjct 2592552 ATTATACAGACATCTTCATCGCAATTGTCTTGTGGGGGTCGTAGCCCTTGATACCAAAGT 2592493 Query 145595 CCTCCGCCCTGAAGTCATCTATGT--CCTCCACCCGC-CTCAGGATCCTGAGC-CTGGGA 145650 |||| | | |||| ||| ||||| | | | | |||| ||| |||| | Sbjct 2592492 CCTCTAATTTCCATCCATCAATGCTACCTCCCTTCTCGCGCGAGATCTCGAGTTCTGGAA 2592433 Query 145651 AAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGAC 145709 | ||| | ||||| | || ||||| | || || | || ||||||| |||||| || Sbjct 2592432 ACTGGC--GAGGCTCACGTTCCAGCTGAATGTTGAGCGCGTCGACGTGGTCGAGGTACAC 2592375 Query 145710 GTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGAC 145769 || ||||| |||| ||||||| | | | || ||| | | | || ||| || | Sbjct 2592374 ATGGGCGTCTCCCATGACGTGGGTAAGGCTACCAGGCACTAAATCACAGACGTGCGCAAG 2592315 Query 145770 CATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCC 145829 ||||| ||||| | | |||||||| || ||||||||||| || || |||||||| | Sbjct 2592314 CATGTGAGTCAGTAACGCATAGCTGGCAATATTGAAGGGCACGCCGAGGCCCATGTCGCA 2592255 Query 145830 CGAGCGCTGGTACAGCTGGC-----AGGAGAGC-----------------------TCCC 145861 || || ||||||||||||| ||| | | || | Sbjct 2592254 GGACCGTTGGTACAGCTGGCAATGCAGGTGGCCCTGCGGCTTAGGCTCGTCCTCGGTCTC 2592195 Query 145862 CGCC--------------------CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGG 145901 ||| || || |||||||| | | || || ||||| Sbjct 2592194 TGCCTCGCGTTTTTGGCGCGGGTACGAGACATAGAACTGCGCGAACATATGACACGGCGG 2592135 Query 145902 CAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-T 145960 ||| |||| | | ||||| || ||||||||||| || |||| ||| | | | || | Sbjct 2592134 CAGCACCATCTTGCGGAGGTCGGCAGGGTTCCAGGCCGTAAGGATGAGACGGC-GATCGT 2592076 Query 145961 CGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGT 146020 |||||| || | || || || || || |||||| ||||| || || || Sbjct 2592075 GGGGGTTTGTCCGCAGCTTGTGGATGAGTTCGGCGATCTGGTCGACGCCTTGTCCTGTGT 2592016 Query 146021 AATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGG 146080 | ||||| |||||||| |||||| |||| || ||||||| |||||| |||||||| || | Sbjct 2592015 AGTCTGTATTGGAGTCGACGTACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAAACAG 2591956 Query 146081 GCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACC 146140 | || ||||| ||| || | ||| || ||| | ||||||| || || || | Sbjct 2591955 GACCAAGGTCGCCGACTTCGCGATGCGTTAGACCGAGGTTGTCGAGGAACTCACGAGAGC 2591896 Query 146141 CGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCC 146198 |||| ||||||| ||||||| ||| | |||| ||| | || || ||| ||| || Sbjct 2591895 CGTTTCCGTCCCAAATCTTGATGCCGGCATCGCTGAG-GGTC-TTTGAGGAAGTGTTACC 2591838 Query 146199 CCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAG 146258 | |||||||||||| ||||| ||| ||| | | ||||| | ||||||||| || Sbjct 2591837 CTCGATGAACCAGAGAAGCTCGACGATGACGGCTCGTGTAAAGACGCGCTTGGTGGTGAG 2591778 Query 146259 CAGGGG 146264 ||||| Sbjct 2591777 GAGGGG 2591772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075531334880