Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq97 141 2e-28
>seq97
Length=371559
Score = 141 bits (156), Expect = 2e-28
Identities = 423/642 (66%), Gaps = 23/642 (4%)
Strand=Plus/Plus
Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868
||||| | ||| | | ||| | ||||| || || ||| ||| || ||||| || ||
Sbjct 81226 GATTTCAACTACCAATACTTCGGCTTCAAGACTCTAGAGCGATCCTACCTCCTGAAGATC 81285
Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928
||||||||||| || || ||| |||||||||| | ||||| || |||||||| ||
Sbjct 81286 GATGGCAAGATTGTTGAGCGACCTCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGG 81345
Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATG-AGTGAACGCTGGATGAC 248987
|| ||||| ||| | || || ||||| |||| | ||| | | ||| | | ||
Sbjct 81346 GGTGACGACATCGAGCGTGTCCTGGAGACCTACAACCTCATGTCCAGCAAGCT-GTTCAC 81404
Query 248988 ACATGCCACACCGACGCTCTTCAACGCCGGTA-CCGTCAACAATCAGCTGAGCTCGTGCT 249046
|| || |||| || || ||||| || |||| || ||| | ||||||| || ||||
Sbjct 81405 TCACGCTTCACCAACCCTGTTCAATGCGGGTACCCCTCAGC-CTCAGCTGTCTTCCTGCT 81463
Query 249047 TTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAAACAGAC-- 249104
| || ||| |||| | || ||| ||||||| || || ||||| || | ||||
Sbjct 81464 TCCTGGTTGACATGAAGGAAGACAGCATCGACGGTATCTACGACACCCTCA---AGACTT 81520
Query 249105 -GGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGT-CTCCAACATCCGAGCG 249162
|| | ||| || || | || || || ||||||||| ||| | || | ||||| ||
Sbjct 81521 GTGCCATGATCTCCAAGATGGCAGGAGGCATCGGTCTCAACGTGCACCGA-ATCCGTGCC 81579
Query 249163 AAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGA 249222
| || || ||||| ||||| || || | ||||| || | || | || ||
Sbjct 81580 ACCGGCTCTTACATTGCCGGTACCAACGGCACCTCCAATGGTGTCATTCCTATGCTCCGT 81639
Query 249223 TGCTTTGAGTCCACCGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTC 249279
||| | ||| || | | | || |||||| ||| | ||| || | |||
Sbjct 81640 GTCTTCAACAACACTGCTCGATACGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTC 81699
Query 249280 GCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAAC 249339
||||| || | || ||||||||||| | || || ||| |||| || ||||||
Sbjct 81700 GCCATTTACCTTGAGCCCTGGCACGCCGACGTTTTTGAATTCTTGGATCTGCGCAAGAAC 81759
Query 249340 AACGGCAACG----AGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGA 249395
||||||| | ||| | | || |||||| | |||| | ||||||| || ||||
Sbjct 81760 CACGGCAAGGAAGAAGCCC----GCGCTCGTGACTTGTTCTTGGCCCTGTGGATCCCCGA 81815
Query 249396 CTTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437
|||||||| || ||| || ||||||| ||||| ||
Sbjct 81816 TCTGTTCATGAAGCGTGTCGAGAAGAACGGCGACTGGACTCT 81857
Score = 98.7 bits (108), Expect = 2e-15
Identities = 113/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 254017 TCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCGCTGGCCCGAACCCTGT 254076
|| |||| || || || || ||||||||||| || ||||| || || |||||| | | |
Sbjct 325713 TCTACGGCCCCCCGGGCACCGGCAAGACGTCGACAATCCTCGCCCTCGCCCGACGCATCT 325654
Query 254077 TGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCTTCTGACGAACGCGGGT 254136
|||| | |||||| | || ||||||||||| ||||| || ||||| |||||
Sbjct 325653 ACGGCGCCGCCAACATGCGCCAGATGGTGCTCGAGCTCAACGCCTCGGACGATCGCGGCA 325594
Query 254137 TGGACGTCGTCCGCGACAAGATCAAGACTTTC 254168
| ||||| || ||||| |||||||||| |||
Sbjct 325593 TCGACGTGGTGCGCGAGCAGATCAAGACGTTC 325562
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073764033687296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |