Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq97 158 2e-33
seq151 104 3e-17
>seq97
Length=371559
Score = 158 bits (174), Expect = 2e-33
Identities = 341/503 (68%), Gaps = 18/503 (4%)
Strand=Plus/Minus
Query 80050 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATG 80109
||||| || || | ||| ||||| | | | || ||||| ||||| || ||||| || | |
Sbjct 81722 TGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACG 81663
Query 80110 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 80169
|||| ||| ||||| || | || | | ||| ||||| | ||||||||| || || |||
Sbjct 81662 TATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTG 81603
Query 80170 GTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCC 80227
|| |||| || || || ||||||| || | | |||| |||| || || |
Sbjct 81602 GTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGA--GACCGATGCCTC 81545
Query 80228 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTAT 80287
||||||| || ||||| | || || || | || || ||||| || || ||||| |
Sbjct 81544 CTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGT 81485
Query 80288 CATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 80347
| || |||||| || || || ||| ||||| || | || || |||||||| |
Sbjct 81484 CTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGA 81425
Query 80348 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA- 80406
| | ||| || |||||||| || ||| || |||| || ||||| ||||| |
Sbjct 81424 ACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGA 81365
Query 80407 ---GCT-GAT-TCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461
||| ||| || | |||| |||| || || ||||||||||| | ||||||||
Sbjct 81364 CACGCTCGATGTCGTCACCCCA--GATG----CCGACAGCGACACGCATGATCATGTGCT 81311
Query 80462 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521
|||||| ||||| |||||| || || |||| | ||| ||| || | ||| || |
Sbjct 81310 GAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTGA 81251
Query 80522 AACCAAAATAGTTGTA--TGAAA 80542
| || || || | ||| |||||
Sbjct 81250 AGCCGAAGTATTGGTAGTTGAAA 81228
>seq151
Length=1813609
Score = 104 bits (114), Expect = 3e-17
Identities = 150/211 (71%), Gaps = 3/211 (1%)
Strand=Plus/Minus
Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018
||| ||||| ||| |||||| ||||| || | | ||| || |||||||| || || |
Sbjct 1086331 ACAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAA 1086272
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078
|| ||||| || |||||||| || ||||| || |||||||| || | ||| |||||
Sbjct 1086271 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAA 1086212
Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT---GTCATG 50135
|| || || || || || || ||||| || | || || || | | | ||| ||
Sbjct 1086211 AATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 1086152
Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTT 50166
|||||| |||||||||||||||||||
Sbjct 1086151 GATCCACCGAATAGCCCAATCGGCCTTCTTT 1086121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718267255722080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |