Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq97 158 2e-33 seq151 104 3e-17 >seq97 Length=371559 Score = 158 bits (174), Expect = 2e-33 Identities = 341/503 (68%), Gaps = 18/503 (4%) Strand=Plus/Minus Query 80050 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATG 80109 ||||| || || | ||| ||||| | | | || ||||| ||||| || ||||| || | | Sbjct 81722 TGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACG 81663 Query 80110 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 80169 |||| ||| ||||| || | || | | ||| ||||| | ||||||||| || || ||| Sbjct 81662 TATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTG 81603 Query 80170 GTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCC 80227 || |||| || || || ||||||| || | | |||| |||| || || | Sbjct 81602 GTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGA--GACCGATGCCTC 81545 Query 80228 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTAT 80287 ||||||| || ||||| | || || || | || || ||||| || || ||||| | Sbjct 81544 CTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGT 81485 Query 80288 CATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 80347 | || |||||| || || || ||| ||||| || | || || |||||||| | Sbjct 81484 CTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGA 81425 Query 80348 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA- 80406 | | ||| || |||||||| || ||| || |||| || ||||| ||||| | Sbjct 81424 ACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGA 81365 Query 80407 ---GCT-GAT-TCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461 ||| ||| || | |||| |||| || || ||||||||||| | |||||||| Sbjct 81364 CACGCTCGATGTCGTCACCCCA--GATG----CCGACAGCGACACGCATGATCATGTGCT 81311 Query 80462 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521 |||||| ||||| |||||| || || |||| | ||| ||| || | ||| || | Sbjct 81310 GAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTGA 81251 Query 80522 AACCAAAATAGTTGTA--TGAAA 80542 | || || || | ||| ||||| Sbjct 81250 AGCCGAAGTATTGGTAGTTGAAA 81228 >seq151 Length=1813609 Score = 104 bits (114), Expect = 3e-17 Identities = 150/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| ||||| ||| |||||| ||||| || | | ||| || |||||||| || || | Sbjct 1086331 ACAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAA 1086272 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || ||||| || |||||||| || ||||| || |||||||| || | ||| ||||| Sbjct 1086271 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAA 1086212 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT---GTCATG 50135 || || || || || || || ||||| || | || || || | | | ||| || Sbjct 1086211 AATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 1086152 Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTT 50166 |||||| ||||||||||||||||||| Sbjct 1086151 GATCCACCGAATAGCCCAATCGGCCTTCTTT 1086121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267255722080