Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq97 152 7e-32
seq151 91.5 2e-13
>seq97
Length=371559
Score = 152 bits (168), Expect = 7e-32
Identities = 340/503 (68%), Gaps = 18/503 (4%)
Strand=Plus/Minus
Query 72133 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATG 72192
||||| || || | ||| ||||| | | | || || || ||||| || ||||| || | |
Sbjct 81722 TGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACG 81663
Query 72193 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 72252
|||| ||| ||||| || | || | | ||| ||||| | ||||||||| | || |||
Sbjct 81662 TATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTG 81603
Query 72253 GTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TGCTAATTGATAGACCTATTCCCC 72310
|| |||| || || || ||||||| || ||| |||| |||| || || |
Sbjct 81602 GTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGA--GACCGATGCCTC 81545
Query 72311 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 72370
||||||| || ||||| | || || || | || || ||||| || || || || |
Sbjct 81544 CTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGT 81485
Query 72371 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 72430
| ||| |||||| || || || ||| ||||| || | || || |||||||| |
Sbjct 81484 CTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGA 81425
Query 72431 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA- 72489
| | ||| || |||||||| || ||| || |||| || ||||| ||||| |
Sbjct 81424 ACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGA 81365
Query 72490 ---GCT-GAT-TCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCT 72544
||| ||| || | |||| |||| || || ||||||||||| | ||| ||||
Sbjct 81364 CACGCTCGATGTCGTCACCCCA--GATG----CCGACAGCGACACGCATGATCATGTGCT 81311
Query 72545 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 72604
|||||| ||||| |||||| || || |||| | ||||||| || | ||| || |
Sbjct 81310 GAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTGA 81251
Query 72605 AACCAAAATAGTTGTA--TGAAA 72625
| || || || | ||| |||||
Sbjct 81250 AGCCGAAGTATTGGTAGTTGAAA 81228
>seq151
Length=1813609
Score = 91.5 bits (100), Expect = 2e-13
Identities = 147/211 (70%), Gaps = 3/211 (1%)
Strand=Plus/Minus
Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123
||| ||||| ||| |||||| |||||||| | | ||| | |||||||| || || |
Sbjct 1086331 ACAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAA 1086272
Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183
|| ||||| || |||||||| || ||||| || || ||||| || | ||| |||||
Sbjct 1086271 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAA 1086212
Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT---GTCATG 42240
|| || || || || || || |||| || | || || || | | ||| ||
Sbjct 1086211 AATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 1086152
Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTT 42271
|||||| |||||||||||||||||||
Sbjct 1086151 GATCCACCGAATAGCCCAATCGGCCTTCTTT 1086121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671137757050720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |