Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq97 170 3e-37
seq151 134 2e-26
>seq97
Length=371559
Score = 170 bits (188), Expect = 3e-37
Identities = 374/554 (68%), Gaps = 6/554 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||||| | ||| ||| | | || |||||| | | | ||| || || | ||
Sbjct 81601 ACCAACGGCACCTCCAATGGTGTCATTCCTATGCTCCGTGTCTTCAACAACACTG-CTCG 81659
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| ||||||||||| || || || || ||| | ||| | ||| | || || ||
Sbjct 81660 ATACGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATTTACCTTGAGCCCTG 81719
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| ||||||||||| || | || ||||||| ||| ||| ||||| || ||
Sbjct 81720 GCACGCCGACGTTTTTGAATTCTTGGATCTGCGCAAGAACCACGGCAAGGAAGAAGCCCG 81779
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | |||||||| | || || ||| | || ||| ||||||||||||| ||| | |
Sbjct 81780 CGCTCGTGACTTGTTCTTGGCCCTGTGGATCCCCGATCTGTTCATGAAGCGTGTCGAGAA 81839
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| |||||| || ||||||||| | || ||||| || | ||||||| ||
Sbjct 81840 GAACGGCGACTGGACTCTCATGTGCCCCAATGAGTGCCCCGGGCTTGCTGATTGCTACGG 81899
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGA-TACGTGAGACGAG 97164
|| ||||| ||| |||| | || ||||| | ||| | || |||| |
Sbjct 81900 TGATGAGTTCGAGAAGCTGTACGAGAAGTATGAGCAGGCTGGCAAAGGTCGCAAGACCA- 81958
Query 97165 TCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCG 97223
|| | | |||| |||||| | |||||| || ||||||| || || || | ||
Sbjct 81959 -TGAAGGCCCAGAAGCTGTGGTATGCCATCTTGGAGGCTCAGACCGAAACCGGCAACCCT 82017
Query 97224 TACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATC 97283
| ||| ||||||||||| | | || || || |||||||| || ||||||||||
Sbjct 82018 TTCATGCTCTACAAGGACAGCTGCAACCGTAAAAGCAACCAGAAGAACCTGGGCACCATT 82077
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343
| ||||| || ||||| || || | |||||| |||| || ||| || |||
Sbjct 82078 CGCAGTTCCAACCTTTGCACTGAGATCATCGAGTACTGTGCTCCCGATGAGGTCGCTGTT 82137
Query 97344 TGCGTTCTGGCATC 97357
||| ||| |||||
Sbjct 82138 TGCAATCTCGCATC 82151
>seq151
Length=1813609
Score = 134 bits (148), Expect = 2e-26
Identities = 211/293 (72%), Gaps = 12/293 (4%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||||||||| ||||| | ||| || | ||||||
Sbjct 1085720 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAAATTGATCTG 1085779
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAG-AG---TTTAT 125134
|||||||| | |||| ||| | | |||| ||||| | || |||| || |||||
Sbjct 1085780 TCCAAGGATCAACACGACTGGAACAATCGTCTGACT---TCCGA-CGAGCAGTTCTTTAT 1085835
Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAA-TCTGTTGA 125193
|| ||||| | ||||||||||||| ||| ||||| |||||||| || || | |||||
Sbjct 1085836 CTCTCACATCCTTGCCTTCTTTGCCGCCTCTGATGGCATCGTCAATGAAAACTTGGTTGA 1085895
Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATC 125252
|||||| ||| | || || |||| ||| ||||| || || || ||||||
Sbjct 1085896 -GCGATTCAGCGGCGAGGTCCAGATCCCTGAGG-CTCGATGCTTCTATGGTTTTCAAATC 1085953
Query 125253 ATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
||||| || ||| | ||||| || | ||||| || ||||| | |||||
Sbjct 1085954 ATGATGGAAAACATCCACTCTGAGACCTACTCATTGCTCATTGATACCTACAT 1086006
Score = 132 bits (146), Expect = 7e-26
Identities = 335/503 (67%), Gaps = 25/503 (5%)
Strand=Plus/Plus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| || || ||||| | |||| |||||||||||| | ||| | || || || | |||
Sbjct 1086116 ATCCGAAAGAAGGCCGATTGGGCTATTCGGTGGATCCAGGACAAGAACTCATCTTTTGCC 1086175
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | ||||| || ||||| ||||| ||||| || ||||| ||| ||| ||| ||
Sbjct 1086176 CAGCGTCTGGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCAGTGGTGCTTTCGCGTCC 1086235
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| |||||||||||||| || |||||||| || |||| | |||||| | ||
Sbjct 1086236 ATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCTTGACATTCTCCAACGAGCTCATT 1086295
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGT 125600
||||| || |||||||| ||| ||||| || |||| || | || |||
Sbjct 1086296 TCTCGTGATGAGGGCCTGCACACCGACTTCGC-------CTGTCTC-CTACACTCT---- 1086343
Query 125601 CCCGAGTGCAGATCC-AGCGATGAA-AAGGTCAT---CAACATTGTAACCGATGCCGTGA 125655
| || ||| || ||| | || || |||| | || | ||||| || || |
Sbjct 1086344 --CACTTGAAGAACCGAGCCAGCAAGCAGATCATTCGTGAGATCATCACCGACGCTGTCA 1086401
Query 125656 GGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCA 125715
|| || || ||||| || ||||| | || || | | | ||||||||||
Sbjct 1086402 ACATCGAGCAGGAGTTCCTGACCGAGGCACTGCCTTGCGCTCTTCTGGGCATGAACTCGG 1086461
Query 125716 AGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC- 125774
| || ||| | ||||| |||||||| || || ||||| || | | |||||
Sbjct 1086462 ACCTCATGAAGCAATACATCGAGTTTGTTGCCGACCGTCTTCT---TGTGGCACTTGGCA 1086518
Query 125775 -CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGG 125832
|| ||||||||||| | || ||||| || |||||| | ||| || || | |
Sbjct 1086519 ACGAGAAGATTTACAAGTCTGCCAACCCCTTCGACTTCATGGAGAACATCTCCCTTGGCG 1086578
Query 125833 GTAAGACCAACTTTTTCGAGAAG 125855
| ||||||||||| |||||||||
Sbjct 1086579 GCAAGACCAACTTCTTCGAGAAG 1086601
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741057606722720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |