Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq96 107 4e-18
>seq96
Length=3495428
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || || ||| || || | ||| || || || || || |||
Sbjct 1450442 GTCGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGACCATCCTCCAGCTGCTTACCA 1450383
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|||||||| || | ||| || || || || || || || || || |||||||| | ||
Sbjct 1450382 GCAAAAATAAGTCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTCGACTTG 1450323
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||||| || ||| ||||| || ||||| ||||| || || || ||
Sbjct 1450322 ACATTGTCGATAGTATCAGAAGATTCGACCTCGAGAGTAATCGTCTTGCCGGTGAGGGTC 1450263
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 1450262 TTGACGAAAATCTGCAT 1450246
Score = 95.1 bits (104), Expect = 3e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| || | || | || || || || || |||||
Sbjct 1450214 GTTGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCAAGCTGCTTTCCG 1450155
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || || || || || || |||||||||||||| | ||
Sbjct 1450154 GCGAAGATGAGTCGCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGAATCTTCGACTTG 1450095
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | || ||| | || ||||| || || ||||||||||| || | ||
Sbjct 1450094 ACATTGTCGATCGTGTCGGATGACTCCACCTCAAGGGTGATAGTCTTACCGGTCAAGGTC 1450035
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| || |||||
Sbjct 1450034 TTGACAAAGATTTGCAT 1450018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151395862605776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |