Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq151 140 2e-28 seq121 140 2e-28 >seq151 Length=1813609 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 664170 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 664111 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 664110 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 664076 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 676870 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 676811 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 676810 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 676776 Score = 132 bits (146), Expect = 3e-26 Identities = 205/293 (70%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254 ||||| ||||| |||||||| ||| ||||||| ||||| | || || || |||||| Sbjct 1147175 GACGCCTTCTATCGCTACAAGATGGAGCGCATCCAGACCAAGATTGAAGGCAAAGGAAAC 1147116 Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314 || || || |||||| | |||||| || || || || | |||| ||||||| | Sbjct 1147115 GGCATCAAGACCGTCGTCGTCAACTTGAGCAGCGTTGCCAACTCCCTCGCTCGCCCTGGC 1147056 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 | ||| | ||||| ||||| | ||| ||||| |||||||| | | |||| ||| Sbjct 1147055 GCATACGTCATCAAATACTTCGGTTTCGAGCTTGGTGCTCAGACAAACATCGATCCCAAG 1146996 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 |||| || | ||| | ||||| | || | || |||||||| || ||| || || Sbjct 1146995 GACGACCGTTGGATCATCAACGGCGCCCACGATTCCGCCAAGCTCCAAGACCACCTCGAT 1146936 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 || || || ||||||||| || || | | ||| | |||||||||||||| Sbjct 1146935 GGTTTCATCAACAAGTTTGTTCTCTGCAAGAAGTGCAAGAACCCGGAGACCGA 1146883 >seq121 Length=11592 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 9924 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 9865 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 9864 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 9830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946497866932