Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq97 156 5e-33 seq151 95.1 2e-14 >seq97 Length=371559 Score = 156 bits (172), Expect = 5e-33 Identities = 438/665 (66%), Gaps = 18/665 (3%) Strand=Plus/Minus Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079 || || || || |||| || ||||| | | ||| || |||| | || || || ||| Sbjct 81884 AGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTC 81825 Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139 || || ||||| || ||||| || || | || | || | | | ||| || || Sbjct 81824 ATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTG 81765 Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199 || ||||| ||||| | ||| | | || || | ||||| || || | ||| Sbjct 81764 CCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAA 81705 Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259 ||||| | | | || || || ||||| || ||||| || | ||||| ||| ||||| || Sbjct 81704 ATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTG 81645 Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319 | || | | ||| ||||| | ||||||||| || || ||||| || | || || Sbjct 81644 AAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAG 81585 Query 63320 CCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 || ||||||| || | | |||| |||| || || |||||||| || ||||| | Sbjct 81584 CCGGTGGCACGGATTCGGTGCACGTTGA--GACCGATGCCTCCTGCCATCTTGGAGATCA 81527 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || || | || || ||||| || || || || || ||| |||||| || | Sbjct 81526 TGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCA 81467 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 | || ||| ||||| || | || || |||||||| || | ||| || ||||||| Sbjct 81466 GGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGT 81407 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC----AATAGCT-GA-GTCTATAT 63551 |||| ||| || || | || ||||| ||||| | ||| || ||| | Sbjct 81406 GAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCAC 81347 Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611 |||| |||| || || ||||||||||| | |||||||||||||| ||||| |||| Sbjct 81346 CCCA--GATG----CCGACAGCGACACGCATGATCATGTGCTGAGGTCGCTCAACAATCT 81293 Query 63612 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 63669 || | || |||| | ||||||| || | ||| || || || || || | ||| Sbjct 81292 TGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTGAAGCCGAAGTATTGGTAGT 81233 Query 63670 TGAAA 63674 ||||| Sbjct 81232 TGAAA 81228 >seq151 Length=1813609 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| ||||| ||| ||| || ||||| || | | ||| | |||||||| || || | Sbjct 1086331 ACAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAA 1086272 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| || |||||||| || ||||| || |||||||| || | ||| ||||| Sbjct 1086271 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAA 1086212 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATG 32836 ||| || || || || || || |||| || | || || || | | | ||| || Sbjct 1086211 AATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 1086152 Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTT 32867 |||||| ||||||||||||||||||| Sbjct 1086151 GATCCACCGAATAGCCCAATCGGCCTTCTTT 1086121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630637691200