Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq97 156 5e-33
seq151 95.1 2e-14
>seq97
Length=371559
Score = 156 bits (172), Expect = 5e-33
Identities = 438/665 (66%), Gaps = 18/665 (3%)
Strand=Plus/Minus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| || || || |||| || ||||| | | ||| || |||| | || || || |||
Sbjct 81884 AGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTC 81825
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| || ||||| || ||||| || || | || | || | | | ||| || ||
Sbjct 81824 ATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTG 81765
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| ||||| ||||| | ||| | | || || | ||||| || || | |||
Sbjct 81764 CCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAA 81705
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | | || || || ||||| || ||||| || | ||||| ||| ||||| ||
Sbjct 81704 ATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTG 81645
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| || | | ||| ||||| | ||||||||| || || ||||| || | || ||
Sbjct 81644 AAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAG 81585
Query 63320 CCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
|| ||||||| || | | |||| |||| || || |||||||| || ||||| |
Sbjct 81584 CCGGTGGCACGGATTCGGTGCACGTTGA--GACCGATGCCTCCTGCCATCTTGGAGATCA 81527
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
|| || || | || || ||||| || || || || || ||| |||||| || |
Sbjct 81526 TGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCA 81467
Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497
| || ||| ||||| || | || || |||||||| || | ||| || |||||||
Sbjct 81466 GGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGT 81407
Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC----AATAGCT-GA-GTCTATAT 63551
|||| ||| || || | || ||||| ||||| | ||| || ||| |
Sbjct 81406 GAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCAC 81347
Query 63552 CCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCT 63611
|||| |||| || || ||||||||||| | |||||||||||||| ||||| ||||
Sbjct 81346 CCCA--GATG----CCGACAGCGACACGCATGATCATGTGCTGAGGTCGCTCAACAATCT 81293
Query 63612 TGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA-- 63669
|| | || |||| | ||||||| || | ||| || || || || || | |||
Sbjct 81292 TGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTGAAGCCGAAGTATTGGTAGT 81233
Query 63670 TGAAA 63674
|||||
Sbjct 81232 TGAAA 81228
>seq151
Length=1813609
Score = 95.1 bits (104), Expect = 2e-14
Identities = 148/211 (70%), Gaps = 3/211 (1%)
Strand=Plus/Minus
Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719
||| ||||| ||| ||| || ||||| || | | ||| | |||||||| || || |
Sbjct 1086331 ACAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAA 1086272
Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779
|| ||||| || |||||||| || ||||| || |||||||| || | ||| |||||
Sbjct 1086271 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAA 1086212
Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT---GTCATG 32836
||| || || || || || || |||| || | || || || | | | ||| ||
Sbjct 1086211 AATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 1086152
Query 32837 TATCCACTTTTGAGCCCAATCGGCCTTCTTT 32867
|||||| |||||||||||||||||||
Sbjct 1086151 GATCCACCGAATAGCCCAATCGGCCTTCTTT 1086121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633630637691200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |