Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq97 329 6e-85
seq151 205 2e-47
>seq97
Length=371559
Score = 329 bits (364), Expect = 6e-85
Identities = 1109/1706 (65%), Gaps = 83/1706 (5%)
Strand=Plus/Minus
Query 243741 TGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTGAGTC 243800
||||||||| ||| || |||| ||| |||| | ||||||||||||||||||||||| |
Sbjct 83062 TGAACTGGATGGGAGCAGCGGCAGCCGTGGTGCGGAGGTAGTACATGCCGGTCTTGAGAC 83003
Query 243801 CACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGGTCGT 243860
| |||| | || ||||||| || | ||| ||| || ||||| |
Sbjct 83002 CGAGCTTCCAGCCTGCGAAGTGCATGCTGGTGATCTTGCCCATTGTG------GGGTCTT 82949
Query 243861 CCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCTGCGG 243920
| | || |||||||||||| ||| |||| ||||| | || || ||||
Sbjct 82948 TCATGTG------GATGTTGAGGGACTGAGACTGATCGATGAAGGCACCACGATCGGCGG 82895
Query 243921 CCATGGTGATGAGGTCCTTC---TGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGA 243977
||| || |||| ||| || || ||||| || |||||||||||| | ||| |
Sbjct 82894 ACATT-TG--GAGGACCTGGCGTTGGGAAATCTCCCACACCGTCTTGTAGAGCGACTTAA 82838
Query 243978 GGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGC 244037
|| || || | ||||||||| | || || || | |||| || |
Sbjct 82837 TGTCGTCCGGAATGTTAGGGATGTTCTGGATAGAACCGTTCTCAGAAATGATGCGGTTCT 82778
Query 244038 GCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCA 244094
|||| ||| ||||| ||||| |||| ||| || | ||| | || |
Sbjct 82777 TCATGGCATCCGACCACAAGCCCATATCTACCAGGTCCTT---CAAGAGCCAGGGGTTAA 82721
Query 244095 CCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGA 244154
| ||||| ||||| || | || || ||||||||||||| ||| | | |||||||
Sbjct 82720 CAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTATAAGGCTCGA 82661
Query 244155 TGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCAT--GGGCGACACCAG 244212
|| || | |||||||| ||||||| || || ||||| ||||| |||||| | ||
Sbjct 82660 AGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGA--AG 82603
Query 244213 CAGACTGTTCCTCACGCCGTGC--CT----CTGGATGCGGAGTCTGAGCTCGTTCCAGTC 244266
|| ||||| | | |||||| || ||| ||| || | ||| ||||||
Sbjct 82602 CAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGT---CTC---CCAGTC 82549
Query 244267 CCACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326
||| | | | ||| | | || |||| |||||| |||||||| || | ||||
Sbjct 82548 CCAAAGGTCGGAGGGCT--TCACGTT-------CCACATATCAAACTGGAGGATACCCTC 82498
Query 244327 -GCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAG 244384
| || |||| |||| | || | | ||| ||||| || || || || | || |
Sbjct 82497 AGATGCTGGGGAA-CCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTTGCACCG 82439
Query 244385 CTCTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCC 244444
|||| | | | |||| ||| |||||||| |||||| |||||||| || || |||
Sbjct 82438 AGGCCGTCAAAG-CAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCC 82380
Query 244445 TTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCG 244504
| | | | |||||| |||| | || |||| | || || || ||||| || |||
Sbjct 82379 TCGGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCG 82320
Query 244505 ATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTG 244564
| || ||||||| ||| ||| ||||| | ||| ||| | |||||| ||||
Sbjct 82319 ACACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGCCTCGATGATGGGGTAGTGGTTG 82260
Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGA 244624
||||||| | |||||| | ||||||| || | | ||| ||| ||| |||
Sbjct 82259 ACGTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTCTGG 82200
Query 244625 AAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACG 244684
|||||||| | || ||||| | | || | ||||| || || |
Sbjct 82199 AAGTCGTA---GCAGC---CCTCGTTG-TAGTCA-----ACAAAGGAAGGCAGAGCCAAT 82152
Query 244685 CTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAG 244744
|| || ||||| || || ||||| || | ||||| || ||||| |||||
Sbjct 82151 GATGCGAGATTGCAAACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAA 82092
Query 244745 AGGTT---ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCG 244801
||||| ||||| ||||||||||||| || || ||| || ||||||| |
Sbjct 82091 AGGTTGGAACTGCGA---ATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTG 82035
Query 244802 TCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAG 244861
||||||||||||||||| || ||||| ||| ||| || | | || | | |||
Sbjct 82034 TCCTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCAC 81975
Query 244862 AGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGG 244921
|| | | ||||| | ||| ||||| | ||||| | ||| || ||||||
Sbjct 81974 AGCTTCTGGGCCTTCATGGTCTTGCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAGC 81915
Query 244922 GCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGA 244981
||||||||| || || || | || ||||||||| ||||||||||||
Sbjct 81914 TTCTCGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGA 81855
Query 244982 CTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGG 245041
|||| |||||| | || ||| | || |||||| || ||||||||||| |||||| |
Sbjct 81854 GTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAG 81795
Query 245042 AAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCA 245101
|| | ||| | | | || ||| ||| |||||| | ||| ||||| || |||
Sbjct 81794 AACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCA 81735
Query 245102 AAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCT 245161
|| |||||| ||||||||||||| | ||| | |||| || ||||| |||||||||||
Sbjct 81734 AAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCG 81675
Query 245162 CCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCC 245217
|||||||| | | | |||||| |||||||| || || |||| | | ||
Sbjct 81674 CCCTGGTCGA----CGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACC 81619
Query 245218 GTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA--GGTTGCTGATG 245275
|| ||| ||||||||| || ||||| | ||| || | | || | ||| |
Sbjct 81618 ATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTT 81559
Query 245276 GACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCT 245335
|| | || | || || || ||||||||| | ||| || |||||| ||||||
Sbjct 81558 GAGA--CCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAG 81501
Query 245336 ATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG 245395
|| || || |||||||| |||||||| | ||| |||||||| |||||||| ||||
Sbjct 81500 ATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGA 81441
Query 245396 GGGCTGCACGAGTTGAACAGAGTGGG 245421
||| | | || |||||||| || ||
Sbjct 81440 GGGGTACCCGCATTGAACAGGGTTGG 81415
>seq151
Length=1813609
Score = 205 bits (226), Expect = 2e-47
Identities = 597/913 (65%), Gaps = 80/913 (9%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || |||| |||||| |||||||| ||||| |||
Sbjct 1085720 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAAATTGATCTG 1085779
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACT-GTCTGAGA----ACGAAAAGTTTTTCCTCA 42414
||||||| || |||| | || | |||||| |||| |||| || ||
Sbjct 1085780 TCCAAGGATCAACACGACTGGAA--CAATCGTCTGACTTCCGACGAGCAGTTCTTTATCT 1085837
Query 42415 AAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCA 42474
|||| || |||||||| ||||||||||| ||||| |||||||| ||| |||
Sbjct 1085838 CTCACATCCTTGCCTTCTTTGCCGCCTCTGATGGCATCGTCAATGAAAACTTGGTTGAGC 1085897
Query 42475 GGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCA 42534
| |||| ||||| ||| | |||||| || |||||||| || || || || |
Sbjct 1085898 GATTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTATGGTTTTCAAATCATGA 1085957
Query 42535 TAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATC 42591
| || ||| | ||||||||| ||| | | |||||| | || |||||| ||| |
Sbjct 1085958 TGGAAAACATCCACTCTGAGACCTACTC---ATTGCTCATTGATACCTACATCAAGGAGC 1086014
Query 42592 CCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGA-----TGCCC----------- 42635
| | | | || | || ||||| ||||| ||||| | | |||
Sbjct 1086015 CTGCCCAACGCACTTACCTCTTCAATGCCATTGAGACCAGTATGTCCCCCACCATGTCTC 1086074
Query 42636 ---------TGCAT-CAAG----------------------------AAGAAGGCGGACT 42657
||||| |||| |||||||| || |
Sbjct 1086075 AGCTCCACGTGCATACAAGCTAACCAGCTCCAGTTCCTTGCATCCGAAAGAAGGCCGATT 1086134
Query 42658 GGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTT 42716
|||| | |||||| || | | || | || | || | | || | ||||| || ||
Sbjct 1086135 GGGCTATTCGGTGGATCCAG-GACAAGAACTCATCTTTTGCCCAGCGTCTGGTTGCTTTC 1086193
Query 42717 ACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG 42776
| ||||| ||||| || |||||| || || ||||| |||||||||||||||||| ||
Sbjct 1086194 GCTGCCGTTGAGGGTATTTTCTTCAGTGGTGCTTTCGCGTCCATCTTCTGGCTCAAGAAG 1086253
Query 42777 AA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835
||| || ||||| || | || ||||| ||||| ||||| | || ||||| ||
Sbjct 1086254 CGTGGTCTC-ATGCCTGGCTTGACATTCTCCAACGAGCTCATTTCTCGTGATGAGGGCCT 1086312
Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACA-AGCCCTCGAAGG 42894
||| | ||||| ||||| ||||| ||| ||| | | | || |||| | |||
Sbjct 1086313 GCACACCGACTTCGCCTGTCTCCTACACTCT---CACTTGAAGAACCGAGCCAGC-AAGC 1086368
Query 42895 AGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGT 42954
|| | || | |||||||| || || || | |||||| |||||||||| || ||
Sbjct 1086369 AGATCATTCGTGAGATCATCACCGACGCTGTCAACATCGAGCAGGAGTTCCTGACCGAGG 1086428
Query 42955 CGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGT-GCAAGTACATCCAGTAC 43013
| ||||| | || | ||||||||| ||||||||| |||| |||||| |||
Sbjct 1086429 CACTGCCTTGCGCTCTTCTGGGCATGAACTCGGACCTCATGAAGCAA-TACATCGAGTTT 1086487
Query 43014 GTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCC 43072
|| ||||||| ||| || ||| || ||| || | | ||||| | | |||
Sbjct 1086488 GTTGCCGACCGTCTTCTTGTGGCACTTGGCAACGAGAAGATT-TACAAGTCTGCCAACCC 1086546
Query 43073 CTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 43132
||||||||| |||||||||||||| | | |||||||||||||| ||||||||||| ||
Sbjct 1086547 CTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGT 1086606
Query 43133 CGCCGACTACCAG 43145
| || ||||||
Sbjct 1086607 TGGTGATTACCAG 1086619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944337169670720
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