Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq1 109 6e-19
seq96 98.7 1e-15
>seq1
Length=4044527
Score = 109 bits (120), Expect = 6e-19
Identities = 154/214 (72%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058
||||| || | ||||||||||| || || ||||| || ||| || || | || ||
Sbjct 542157 CACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCTTC 542216
Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118
|||||||| || ||||| || |||||||||||||| | || | | ||||||||||
Sbjct 542217 AAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTG 542276
Query 42119 GATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 42177
||| || |||| ||| | | | |||||| || ||||| || | ||||| || |
Sbjct 542277 GATCTTGGACTTGA-CGTTGTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCT 542335
Query 42178 TGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
| ||||| || ||||| || ||||| ||||| ||
Sbjct 542336 TCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 542369
>seq96
Length=3495428
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | || || || | || || |||||||| || |||||
Sbjct 1450209 CTCCTTCTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCAAGCTGCTTTCCGGCGAA 1450150
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
||||||||||||||||| | || | | |||||| ||| ||| | || | ||||
Sbjct 1450149 GATGAGTCGCTGCTGGTCTGGGGGGATACCCTCCTTATCC-TGAATCTTCGACTTGACAT 1450091
Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | ||||||| || ||||| || | ||||| || || || || | ||||| |
Sbjct 1450090 TGTCGATCGTGTCGGATGACTCCACCTCAAGGGTGATAGTCTTACCGGTCAAGGTCTTGA 1450031
Query 42196 CAAAGATTTGCAT 42208
|||||||||||||
Sbjct 1450030 CAAAGATTTGCAT 1450018
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| ||||||||| ||| || || | || || |||||||||||||| ||
Sbjct 1450437 CTCCTTCTGAATGTTGTAATCACTCAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAA 1450378
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| |||||||||||||| | || | || |||||||| | ||| | || | ||||
Sbjct 1450377 AATAAGTCGCTGCTGGTCTGGGGGGATGCCCTCCTTGT-CTTGAATCTTCGACTTGACAT 1450319
Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | || || ||||| || |||| || || || ||||| || || ||||| |
Sbjct 1450318 TGTCGATAGTATCAGAAGATTCGACCTCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGA 1450259
Query 42196 CAAAGATTTGCAT 42208
| || || |||||
Sbjct 1450258 CGAAAATCTGCAT 1450246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543211632092480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |