Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq85 298 7e-76
seq129 102 1e-16
seq97 100 4e-16
seq1 93.3 5e-14
>seq85
Length=3693789
Score = 298 bits (330), Expect = 7e-76
Identities = 994/1533 (65%), Gaps = 35/1533 (2%)
Strand=Plus/Minus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| || || || |||| || ||||| | ||| || || || || || ||
Sbjct 715043 TCATCCTCCTCCTTGAACTTCTCGGCATCGGAAAGCATGCGCTCGATATCCTCCTTGGAC 714984
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
|| | ||||| || || || || ||||||| | ||| || || | | |||| || |
Sbjct 714983 AAGCGACCCTTGTCGTTGGTGATGATAATCTTGTTGGACTTGCCAGTGCCCTTCTCGACG 714924
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
|| || |||| ||||| || ||||| | |||||| | || | || || || |
Sbjct 714923 GCGGAGACGTTCATGATACCGTTGGCATCGAGATCGAAGGTAACCTCGATCTGAGGAACA 714864
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | || || | ||||| || || | || || | || | | |||| ||| |
Sbjct 714863 CCACGGGGGGCAGGGGGAATGCCAGTGAGCTCGAACTTGCCCATCAGGTTGTTGTCCTTG 714804
Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATT--GTCACCGCAGGTTGATTATCTTGTG 6866
| || || ||||| || || || | ||| | ||||| || || || ||
Sbjct 714803 GTGCGCTGGCGCTCACCCTCGTAAACCTGAATGAGGACACCG--GGCTGGTTGTCGGAGA 714746
Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926
|| ||||||| | ||||| | ||||| || || || | ||||| | | ||
Sbjct 714745 AGGTAGAGAAGACCTCAGACTTCTTGGTGGGAATGGTGGTGTTGCGGGGAATGAGCTTGG 714686
Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986
|||| || ||||| ||| |||| || || || ||||| | ||||| ||| | |
Sbjct 714685 TCATCATGCCACCAGCAGTCTCGATACCGAGGGAGAGAGGGGCAACGTC---GAGAAGGA 714629
Query 6987 GG-TCT------TGAACA--GATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCG 7037
|| ||| || || || | | ||||| | | |||||||| || || |
Sbjct 714628 GGATCTCGCTGGTGGACTTGGAGCTGGTG---TCACCAGACAGAATGGCGGCCTGAACGG 714572
Query 7038 TCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAA 7097
|| ||||| || || |||||||||||||| || | || || | || || ||||| |
Sbjct 714571 CGGCACCGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGA 714512
Query 7098 AATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGA 7157
| || || | | | | || | ||||| || || || |||||||| | ||||
Sbjct 714511 AGTAGTCGGTAATGAGCTTCTGGACACGGGGGATACGGGTGGAGCCACCGACGAGGACGA 714452
Query 7158 TTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCA 7217
| || | || |||||||| || | ||| || ||||| || | |
Sbjct 714451 TCTCGTGGACGAGGCTCTTATCGATTTTCGCGTCGGCGAGGACACGGTCGACGGGCTGGA 714392
Query 7218 TACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTAT 7277
|| ||||| | ||| || || ||||| ||||| || ||||| ||||| || |
Sbjct 714391 TAGTGGATCGGAAGAGATCCTGGCAGAGCTCCTCGAAACGAGCTCGGGTGATGGAGGTGT 714332
Query 7278 AGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATA 7337
|||| |||| || ||| | | || || || || || | || || || | || || |
Sbjct 714331 AGAAGTCAATACCCTCGAAGAGAGAGTCGATCTCGATAGAGGTCTGCGCGGAGGAGGAAA 714272
Query 7338 ACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGG 7397
|||||||| || ||||| || || || || | ||| ||||| || || || |
Sbjct 714271 GAGTTCGCTTGGCACGCTCGCAGGCAGTGCGGAGACGTCGAAGCGCGCGAACATTGGAGC 714212
Query 7398 AAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAAT 7457
| |||||| ||||| || | ||| || || | | ||||| || ||| | |
Sbjct 714211 TCAAATCTTTTTTATGCTTTCTTTTGAATTCATTAACAAAGTGGTTAACGAGACGGTTGT 714152
Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517
|||| || || ||||||| ||| || || || || || | ||||| || ||||||||
Sbjct 714151 CGAAGTCCTCGCCACCCAGGTGAGTGTCACCAGCAGTTGACTTGACCTCGAAGATACCCT 714092
Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577
| || ||| | | | |||||||| || ||||||||||| || || || ||||| ||||
Sbjct 714091 CCTCGATGGTGAGGAGAGAAACATCGAAGGTACCACCACCGAGATCGAAGATGAGGACGT 714032
Query 7578 T-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| ||| || | || | ||||| ||||||||||| || || || || || || || ||
Sbjct 714031 TGCGT-TCACCCTCAATCTTCTTGTCGAGACCGTAGGCAATGGCGGCAGCAGTGGGCTCG 713973
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || || || || ||| ||||||||||| | ||||| || || || || ||
Sbjct 713972 TTGATGATTCGGAGGACGTTGAGGCCAGCAATGAGACCGGCATCCTTGGTAGCCTGGCGC 713913
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| |||||| |||||||| ||||| || ||||| |||| | || ||| ||||||
Sbjct 713912 TGGCTATCGTTGAAGTAGGCGGGGACAGTGACGACAGCGTTGTTAACGGTCTCACCGAGG 713853
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| | || ||| | || ||| || || || ||||| ||||| ||||| || | |
Sbjct 713852 TAGGCCTCAGCGGTCTCACGCATCTTAGTGAGGACCATGGATGAGATCTCCTCGGGGGTG 713793
Query 7817 AACTGTTTCGTT-TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC--- 7872
|| || | ||| || || || || || || || || ||||| || || ||||
Sbjct 713792 AA-GGTCTTGTTCTCGCCCTTGAACTCGACCTCGATGATGGGCTT----GC--CACCCTT 713740
Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932
| ||| | ||| | | | | ||||| ||| | ||||||| || |||||
Sbjct 713739 GTCGATGATCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGCATCGCTGAACTT 713680
Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992
| ||||| | |||||| || || || || ||||| | ||||||||||| |||||
Sbjct 713679 GCGGCCGATCAAACGCTTGGCGTCGAAGACGGTGTTCTGAGGGTTCATGGCGACCTGGTT 713620
Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052
||| || || || ||||| ||||| || | || || || ||||| | || || ||
Sbjct 713619 CTTGGCGGCATCTCCGATCAGACGCTC---GGTGTCGGTGAAACCGACGAAGGAAGGAGT 713563
Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTC 8085
|||||||| || |||||||| ||||| || ||
Sbjct 713562 GGTTCGATTGCCCTGGTCGTTGGCAATGATATC 713530
Score = 140 bits (154), Expect = 4e-28
Identities = 362/545 (66%), Gaps = 15/545 (3%)
Strand=Plus/Plus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| || || |||||||| ||||| || ||| || | || ||| | | ||
Sbjct 344724 AGGTCCTCGAATCGGGCACGGGTGATGGACATAGTGAAGTCCTCACCATCGAAGAGAGAG 344783
Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
||||| || || || | || || || | || | || ||||| || ||||| || |
Sbjct 344784 TCAATCTCGATAGTGGCCTGAGCACCGCTG--GACAGGGTACGCTTGGCACGCTCGCAAG 344841
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTT 7421
| ||||| | ||| || || || || || | ||||| | ||| ||||| || ||
Sbjct 344842 CAGTTCGGAGACGGCGCAGAGCGCGGGGATCGCCGGAGAGATCCTTCTTGCTCTTGCGGG 344901
Query 7422 TAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480
| ||||| | | |||| |||| |||| | | |||||||| | |||||||| ||
Sbjct 344902 TGAACTCCTTCTTGCAGTGGTCGA-GGAGGTTGGTGTCGAAATCCTGACCACCCAGATGG 344960
Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540
|| || || ||||| || ||||| |||| ||| || | ||||| | | || |||
Sbjct 344961 GTGTCACCAGCGGTGGCCTTGACAGTGAAGACACCACCCTGGATGTTGAGGAGGGACACA 345020
Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTA 7600
|| || ||||||||||| || || | || || ||||| || | ||| | ||||
Sbjct 345021 TCGAAAGTACCACCACCGAGATCGTAGATCAGGACGTTGCGCTC--CTTCTCAG-ACTTA 345077
Query 7601 TCG------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654
|| |||||||| ||||| || || || || || || || || || || || |
Sbjct 345078 CCGGCGCCAAGACCGTAGGCGATGGCGGCAGCGGTGGGCTCGTTGATGATGCGGAGGACG 345137
Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714
|| || || ||||| | | || || || || || ||||| || ||||| ||||||
Sbjct 345138 TTGAGACCGGCAATGGAACCGGCGTCCTTGGTGGCCTGTCGCTGGTTGTCGTTGAAGTAG 345197
Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774
|| || || || | ||| || | | ||| ||||| || || | | || || || ||
Sbjct 345198 GCGGGAACAGTGATGACGGCCTTCTCGACCTTCTTGCCAAGCTTGGTCTCGGCAATCTCC 345257
Query 7775 TTCAT 7779
|||||
Sbjct 345258 TTCAT 345262
>seq129
Length=2409468
Score = 102 bits (112), Expect = 1e-16
Identities = 224/336 (67%), Gaps = 6/336 (2%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| || ||||| | ||| || || || ||| | ||||| || || | |||
Sbjct 1397037 ATCGAAATCCTCGCCACCGAGGTGAGTGTCACCGTTGGTGGACTTGACCTCGAAAACACC 1397096
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
| || | || | || | |||||| ||||||||||| || || ||| ||
Sbjct 1397097 GTTCTGGATCTCCAAGATGGAGATATCAAAGGTACCACCACCAAGATCGTAAACAGCGAC 1397156
Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
| | ||| | || ||| ||||||||||| || | ||| || || || || ||
Sbjct 1397157 GACCCGGTCGGCCTC------CTTCTCGAGACCGTAGGCCAAAGCAGCGGCAGTAGGCTC 1397210
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|||| | ||| ||| ||| ||||||| ||| | ||||| || || |||||
Sbjct 1397211 GTTAACGACACGGAGAACGTTGAGGCCAGAAATCTGACCGGCATCCTTGGTACTCTGTCG 1397270
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| || |||||||||||||| ||||| || ||||| |||| | ||| ||| |||
Sbjct 1397271 CTGAGAGTCGTTAAAGTAGGCGGGGACAGTGACGACAGCGTTCTTGATGGGCTTTGAGAG 1397330
Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAAC 7791
||| | || || | || ||||| ||| | || ||
Sbjct 1397331 ATAAGCCTCAGCCGTTTCCTTCATCTTGTTGAGGAC 1397366
>seq97
Length=371559
Score = 100 bits (110), Expect = 4e-16
Identities = 291/444 (66%), Gaps = 13/444 (3%)
Strand=Plus/Minus
Query 105559 TCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTC 105618
|| || || |||||||||| ||| || ||||||| ||| | || | ||| ||| |
Sbjct 81836 TCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGTCACGAGCGCGG 81777
Query 105619 GCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCAT 105678
|| ||||| | || || ||| || | || | || || | || |||||||||||
Sbjct 81776 GCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGTCGGCGTGCCAG 81717
Query 105679 GGTTCTAAATAGACTGCAATAG-ACC------CTTTACGACGCCCCGCTTGATTGACATA 105731
|| || | || | || | || ||| ||| | ||||| || | ||| ||
Sbjct 81716 GGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCC----TGGTCGACGTA 81661
Query 105732 TCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGT 105791
|| || || ||| | || || | ||| ||||| | ||||| ||| || || || ||
Sbjct 81660 TCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTGGT 81601
Query 105792 TCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGC 105851
|| ||| | || | ||||| | ||| |||| | || || || || ||
Sbjct 81600 ACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCGATGCCTCCTGC 81541
Query 105852 CCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTC 105911
| ||| ||| ||||| || | || ||||| ||||||||||| || |||||
Sbjct 81540 CATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGTCTTC 81481
Query 105912 CTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACA 105970
||| | ||| |||||| || || |||| || || ||| || ||||| ||||||||||
Sbjct 81480 CTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGG-CTGAGGGGTACCCGCATTGAACA 81422
Query 105971 GAGTTGGTGTTGCATGAATGAACA 105994
| ||||||| || ||| ||||||
Sbjct 81421 GGGTTGGTGAAGCGTGAGTGAACA 81398
>seq1
Length=4044527
Score = 93.3 bits (102), Expect = 5e-14
Identities = 169/244 (69%), Gaps = 5/244 (2%)
Strand=Plus/Plus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||||||||| || || || ||||| || ||| || |||| |||
Sbjct 1244472 ATCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCGGTAGCCAGGACCTCGAAGACACC 1244531
Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575
|||||| | | || ||||| || ||||||||||| || || | || |
Sbjct 1244532 CTGGTCAATGGAGAGAAGAGACACATCGAAGGTACCACCACCGAGATCGTA---GACAAT 1244588
Query 7576 GTTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634
|| | ||| ||| | | | |||| || ||||| || |||||||| || || || || |
Sbjct 1244589 AATC-TGTCGCTCGCCGTCGGTCTTGTCCAGACCATAAGCGATAGCGGCGGCGGTGGGCT 1244647
Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694
| || | || || || ||| ||||| ||||| | | ||||| || || || ||||
Sbjct 1244648 CGTTGACAACTCGGAGGACGTTGAGGCCGGCAATGATACCGGCATCCTTGGTAGCCTGTC 1244707
Query 7695 GTTG 7698
| ||
Sbjct 1244708 GCTG 1244711
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635131434464480
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