Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 1e-18
seq96 98.7 6e-16
>seq1
Length=4044527
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||| ||||| ||||| || ||||| ||||| ||||| ||| |||| |||| ||
Sbjct 542158 ACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCA 542217
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || ||||| || || ||||| |||||||| | || | |||||||||||
Sbjct 542218 AGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGG 542277
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| |||||| | || | || | ||| || || | ||| || || ||
Sbjct 542278 ATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 542337
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984
|||||||| ||||| || ||||||||||| ||
Sbjct 542338 CCCGTGAGGGTCTTGACGAAGATCTGCATCTT 542369
>seq96
Length=3495428
Score = 98.7 bits (108), Expect = 6e-16
Identities = 152/215 (71%), Gaps = 8/215 (4%)
Strand=Plus/Minus
Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831
||||| ||||| || || ||||||||||| || || ||| | || |||| ||
Sbjct 1450455 AACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGACCATCCTC 1450396
Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891
|||||| || || ||||| || ||||| ||||||||| | || | |||||||||||
Sbjct 1450395 CAGCTGCTTACCAGCAAAAATAAGTCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTG 1450336
Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947
||||||| ||||| || | ||||| ||| | || || |||| || || |
Sbjct 1450335 AATCTTCGACTTGAC--AT--TGTCGATAGTATCAGAAGATTCGACCTCGAGAGTAATCG 1450280
Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || || ||||| ||||| || || |||||||||
Sbjct 1450279 TCTTGCCGGTGAGGGTCTTGACGAAAATCTGCATA 1450245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324632919486816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |