Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq97 201 2e-46 seq151 127 4e-24 >seq97 Length=371559 Score = 201 bits (222), Expect = 2e-46 Identities = 835/1287 (65%), Gaps = 63/1287 (5%) Strand=Plus/Minus Query 221416 CGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGG 221474 ||||| ||||||||||| ||||||||||||||| |||||| | ||| | ||||||| Sbjct 82434 CGTCAAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAA-CTCACGAGCCTCGG 82376 Query 221475 GAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534 | || ||||||||| || || | | ||| | || || || ||||| || |||| || Sbjct 82375 GGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGACAC 82316 Query 221535 CGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592 | ||||| | ||| | | ||||| | |||| || || | ||| || |||||| Sbjct 82315 CAATGGGTCGGTGACGCATGTTGCTGTTGCGG--GCCTCGATGATGGGGTAGTGGTTGAC 82258 Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652 |||||| | ||||| | ||| | || || | |||||| ||||||||| Sbjct 82257 GTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTCTGGAA 82198 Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGC-AACGC 221711 | | | || ||| |||| | | || ||||| | || || || | Sbjct 82197 GTCGTA---------GCAGCCCTCGTTGTAG---TCAACAAAGGAAGGCAGAGCCAATGA 82150 Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTA---TACTGTATGATCTCTGTAC 221768 || | || || || || || ||||| || | | | |||| |||||||| || | Sbjct 82149 TG-CGAGATTGCAAACAGCGACCTCATC---GGGAGCACAGTACTCGATGATCTCAGTGC 82094 Query 221769 AGAGGTTGCTGCACTTG--ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826 | |||||| | ||| ||||| ||||||| || || || || || ||| |||| Sbjct 82093 AAAGGTTG--GAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTG-CAGC 82037 Query 221827 -GTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885 ||||||||||||||| || || ||| || || ||||||| ||| || | || Sbjct 82036 TGTCCTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACC 81977 Query 221886 AGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCG---GTCTTTTCATACCCGG 221942 | || | ||||| || | | ||||| ||| | | | || |||||| Sbjct 81976 ACAGCT-TCTGGGCCTT--CATGGTCTTGCG---ACCTTTGCCAGCCTGCTCATACTTCT 81923 Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002 || ||| | || |||| |||||||| || | || || || ||| ||| | Sbjct 81922 CGTACAGCTTCTCGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGC 81863 Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062 |||| ||| |||||| ||| | | ||| | || |||||| || || |||||||||| Sbjct 81862 ACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACA 81803 Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 | ||| || | || | | || || ||| ||||| ||| || | |||||||| Sbjct 81802 GGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCA 81743 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 | || ||||||| ||| |||||||| ||||| || || | ||| | ||| |||||||||| Sbjct 81742 AGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCT 81683 Query 222183 TGTTGCCACCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTAC 222240 ||||||| ||||| || || ||| ||| | |||||||| || || | || | Sbjct 81682 TGTTGCCGCCCTGGTCGACGTATC--GAGCAGTGTTGTTGAAGACACGGAGCATAGGAAT 81625 Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACT 222300 | || ||||| |||||||| || |||||| | ||| ||| | || | | Sbjct 81624 GACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCAC---GGATTCG 81568 Query 222301 G-GCA----GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355 | ||| || | ||||| || || || || ||||||||||| || ||||||| Sbjct 81567 GTGCACGTTGAGA--CCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGG 81510 Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415 ||||| ||| || || || ||| ||||| | || | ||| || || || |||| | Sbjct 81509 GTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGC 81450 Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGC-CCCT 222474 |||| | | || || || || ||||| || || ||||| || || ||| || Sbjct 81449 TGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAA-CAGCTTGCT 81391 Query 222475 AGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGG 222533 ||||| || | ||| ||||| | ||| | |||||| ||| ||| || | | | | Sbjct 81390 GGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCG-ACAG 81332 Query 222534 CGCATCTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAG 222591 || | |||| ||||| ||| || | ||| ||| || | || || || || Sbjct 81331 CGACACGCATGATCATGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCT--TCAGGAG 81274 Query 222592 GTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAAC 222651 ||| ||| || ||||||||||| || ||||| | | || || || | | | | || Sbjct 81273 GTAGGATCGCTCTAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAATCACGGTCATAGAC 81214 Query 222652 CACGGCGGCGTCCAGCTCCGACTTGTG 222678 | ||| | ||||| |||| ||||| Sbjct 81213 GATGGCAGAGTCCAACTCCTCTTTGTG 81187 >seq151 Length=1813609 Score = 127 bits (140), Expect = 4e-24 Identities = 328/493 (67%), Gaps = 13/493 (3%) Strand=Plus/Plus Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893 ||||| || ||||||| | | ||| | | | |||| | |||| ||||| || || Sbjct 1086134 TGGGCTATTCGGTGGATCCAGGACAAGAACTCATCTTTTGCCCAGCGTCTGGTTGCTTTC 1086193 Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953 ||||| || ||||| || || ||||| ||| | || ||| ||||||||||||||||| || Sbjct 1086194 GCTGCCGTTGAGGGTATTTTCTTCAGTGGTGCTTTCGCGTCCATCTTCTGGCTCAAGAAG 1086253 Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013 || |||||| || || || |||||||||||||| | || ||||| || Sbjct 1086254 CGTGGTCTCATGCCTGGCTTGACATTCTCCAACGAGCTCATTTCTCGTGATGAGGGCCTG 1086313 Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAG-A 26072 |||| || || ||||| || |||||| |||||| || | | |||| | Sbjct 1086314 CACACCGACTTCGCCTGTCT--CCTACAC-TCTCACTTGAAGAACCGAGC-CAGCAAGCA 1086369 Query 26073 GA-CCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNN 26131 || | || || ||||||| || ||||| | |||||| ||||||| | Sbjct 1086370 GATCATTCGTGAG-ATCATCACCGACGCTGTCAACATCGAGCAGGAGTTCCTGACCGAGG 1086428 Query 26132 NNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATTGAGTAT 26190 ||||||||||| | || ||||||| |||||||| |||| | Sbjct 1086429 CACTGCCTTGCGCTCTTCTGGGCATGAAC-TCGGACCTCATGAAGCAATACATCGAGTTT 1086487 Query 26191 GTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTAC-AGTACGCCTAACC 26248 || ||||||| ||| | |||| || || || || | | ||| ||| ||| |||| Sbjct 1086488 GTTGCCGACCGTCTTCTTGTGGCA-CTTGGCAACGAGAAGATTTACAAGTCTGCC-AACC 1086545 Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308 | |||||||| ||||| ||||| || | | || |||||||||||||| || ||| | | Sbjct 1086546 CCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 1086605 Query 26309 TCGGCGACTATCA 26321 | || || || || Sbjct 1086606 TTGGTGATTACCA 1086618 Score = 86.0 bits (94), Expect = 1e-11 Identities = 174/258 (67%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | |||||||||||||| | ||| |||||| ||||| || ||||||||| Sbjct 1085720 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAAATTGATCTG 1085779 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTC---TATCCAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| ||| |||| || || | | ||||||||| ||| || Sbjct 1085780 TCCAAGGATCAACACGACTGGAACAATCGTCTGACTTCCGACGAGCAGTTCTTTATCTCT 1085839 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || |||||||| ||||||||||| || || || || || || ||| || Sbjct 1085840 CACATCCTTGCCTTCTTTGCCGCCTCTGATGGCATCGTCAATGAAAACTTGGTTGAGCGA 1085899 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | | || || ||| | ||||| || ||||| ||||| || || || Sbjct 1085900 TTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTATGGTTTTCAAATCATGATG 1085959 Query 25714 GAAAATGTGCACTCTGAG 25731 ||||| | ||||||||| Sbjct 1085960 GAAAACATCCACTCTGAG 1085977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842802983680