Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq97 201 2e-46
seq151 127 4e-24
>seq97
Length=371559
Score = 201 bits (222), Expect = 2e-46
Identities = 835/1287 (65%), Gaps = 63/1287 (5%)
Strand=Plus/Minus
Query 221416 CGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGG 221474
||||| ||||||||||| ||||||||||||||| |||||| | ||| | |||||||
Sbjct 82434 CGTCAAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAA-CTCACGAGCCTCGG 82376
Query 221475 GAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATAC 221534
| || ||||||||| || || | | ||| | || || || ||||| || |||| ||
Sbjct 82375 GGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGACAC 82316
Query 221535 CGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGAC 221592
| ||||| | ||| | | ||||| | |||| || || | ||| || ||||||
Sbjct 82315 CAATGGGTCGGTGACGCATGTTGCTGTTGCGG--GCCTCGATGATGGGGTAGTGGTTGAC 82258
Query 221593 GTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTG 221652
|||||| | ||||| | ||| | || || | |||||| |||||||||
Sbjct 82257 GTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTCTGGAA 82198
Query 221653 ATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGC-AACGC 221711
| | | || ||| |||| | | || ||||| | || || || |
Sbjct 82197 GTCGTA---------GCAGCCCTCGTTGTAG---TCAACAAAGGAAGGCAGAGCCAATGA 82150
Query 221712 TGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTA---TACTGTATGATCTCTGTAC 221768
|| | || || || || || ||||| || | | | |||| |||||||| || |
Sbjct 82149 TG-CGAGATTGCAAACAGCGACCTCATC---GGGAGCACAGTACTCGATGATCTCAGTGC 82094
Query 221769 AGAGGTTGCTGCACTTG--ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGC 221826
| |||||| | ||| ||||| ||||||| || || || || || ||| ||||
Sbjct 82093 AAAGGTTG--GAACTGCGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTG-CAGC 82037
Query 221827 -GTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCC 221885
||||||||||||||| || || ||| || || ||||||| ||| || | ||
Sbjct 82036 TGTCCTTGTAGAGCATGAAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACC 81977
Query 221886 AGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCG---GTCTTTTCATACCCGG 221942
| || | ||||| || | | ||||| ||| | | | || ||||||
Sbjct 81976 ACAGCT-TCTGGGCCTT--CATGGTCTTGCG---ACCTTTGCCAGCCTGCTCATACTTCT 81923
Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002
|| ||| | || |||| |||||||| || | || || || ||| ||| |
Sbjct 81922 CGTACAGCTTCTCGAACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGC 81863
Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062
|||| ||| |||||| ||| | | ||| | || |||||| || || ||||||||||
Sbjct 81862 ACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACA 81803
Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122
| ||| || | || | | || || ||| ||||| ||| || | ||||||||
Sbjct 81802 GGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCA 81743
Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182
| || ||||||| ||| |||||||| ||||| || || | ||| | ||| ||||||||||
Sbjct 81742 AGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCT 81683
Query 222183 TGTTGCCACCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTAC 222240
||||||| ||||| || || ||| ||| | |||||||| || || | || |
Sbjct 81682 TGTTGCCGCCCTGGTCGACGTATC--GAGCAGTGTTGTTGAAGACACGGAGCATAGGAAT 81625
Query 222241 CAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACT 222300
| || ||||| |||||||| || |||||| | ||| ||| | || | |
Sbjct 81624 GACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCAC---GGATTCG 81568
Query 222301 G-GCA----GACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGA 222355
| ||| || | ||||| || || || || ||||||||||| || |||||||
Sbjct 81567 GTGCACGTTGAGA--CCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGG 81510
Query 222356 GTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATC 222415
||||| ||| || || || ||| ||||| | || | ||| || || || |||| |
Sbjct 81509 GTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGC 81450
Query 222416 TGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGC-CCCT 222474
|||| | | || || || || ||||| || || ||||| || || ||| ||
Sbjct 81449 TGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAA-CAGCTTGCT 81391
Query 222475 AGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGG 222533
||||| || | ||| ||||| | ||| | |||||| ||| ||| || | | | |
Sbjct 81390 GGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCG-ACAG 81332
Query 222534 CGCATCTCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAG 222591
|| | |||| ||||| ||| || | ||| ||| || | || || || ||
Sbjct 81331 CGACACGCATGATCATGTGCTGAGGTCGCTCAACAATCTTGCCATCGATCT--TCAGGAG 81274
Query 222592 GTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAAC 222651
||| ||| || ||||||||||| || ||||| | | || || || | | | | ||
Sbjct 81273 GTAGGATCGCTCTAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAATCACGGTCATAGAC 81214
Query 222652 CACGGCGGCGTCCAGCTCCGACTTGTG 222678
| ||| | ||||| |||| |||||
Sbjct 81213 GATGGCAGAGTCCAACTCCTCTTTGTG 81187
>seq151
Length=1813609
Score = 127 bits (140), Expect = 4e-24
Identities = 328/493 (67%), Gaps = 13/493 (3%)
Strand=Plus/Plus
Query 25834 TGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTT 25893
||||| || ||||||| | | ||| | | | |||| | |||| ||||| || ||
Sbjct 1086134 TGGGCTATTCGGTGGATCCAGGACAAGAACTCATCTTTTGCCCAGCGTCTGGTTGCTTTC 1086193
Query 25894 GCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAG 25953
||||| || ||||| || || ||||| ||| | || ||| ||||||||||||||||| ||
Sbjct 1086194 GCTGCCGTTGAGGGTATTTTCTTCAGTGGTGCTTTCGCGTCCATCTTCTGGCTCAAGAAG 1086253
Query 25954 AAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTC 26013
|| |||||| || || || |||||||||||||| | || ||||| ||
Sbjct 1086254 CGTGGTCTCATGCCTGGCTTGACATTCTCCAACGAGCTCATTTCTCGTGATGAGGGCCTG 1086313
Query 26014 CACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCAAG-A 26072
|||| || || ||||| || |||||| |||||| || | | |||| |
Sbjct 1086314 CACACCGACTTCGCCTGTCT--CCTACAC-TCTCACTTGAAGAACCGAGC-CAGCAAGCA 1086369
Query 26073 GA-CCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNNNNN 26131
|| | || || ||||||| || ||||| | |||||| ||||||| |
Sbjct 1086370 GATCATTCGTGAG-ATCATCACCGACGCTGTCAACATCGAGCAGGAGTTCCTGACCGAGG 1086428
Query 26132 NNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATTGAGTAT 26190
||||||||||| | || ||||||| |||||||| |||| |
Sbjct 1086429 CACTGCCTTGCGCTCTTCTGGGCATGAAC-TCGGACCTCATGAAGCAATACATCGAGTTT 1086487
Query 26191 GTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTAC-AGTACGCCTAACC 26248
|| ||||||| ||| | |||| || || || || | | ||| ||| ||| ||||
Sbjct 1086488 GTTGCCGACCGTCTTCTTGTGGCA-CTTGGCAACGAGAAGATTTACAAGTCTGCC-AACC 1086545
Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308
| |||||||| ||||| ||||| || | | || |||||||||||||| || ||| | |
Sbjct 1086546 CCTTCGACTTCATGGAGAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 1086605
Query 26309 TCGGCGACTATCA 26321
| || || || ||
Sbjct 1086606 TTGGTGATTACCA 1086618
Score = 86.0 bits (94), Expect = 1e-11
Identities = 174/258 (67%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | ||| |||||| ||||| || |||||||||
Sbjct 1085720 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCCGAGGAAATTGATCTG 1085779
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTC---TATCCAAAGACGAGCAGCATTTTCTCAAG 25593
||||||| ||| |||| || || | | ||||||||| ||| ||
Sbjct 1085780 TCCAAGGATCAACACGACTGGAACAATCGTCTGACTTCCGACGAGCAGTTCTTTATCTCT 1085839
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|| | | || |||||||| ||||||||||| || || || || || || ||| ||
Sbjct 1085840 CACATCCTTGCCTTCTTTGCCGCCTCTGATGGCATCGTCAATGAAAACTTGGTTGAGCGA 1085899
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | | || || ||| | ||||| || ||||| ||||| || || ||
Sbjct 1085900 TTCAGCGGCGAGGTCCAGATCCCTGAGGCTCGATGCTTCTATGGTTTTCAAATCATGATG 1085959
Query 25714 GAAAATGTGCACTCTGAG 25731
||||| | |||||||||
Sbjct 1085960 GAAAACATCCACTCTGAG 1085977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928842802983680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |