Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq84 136 6e-26
seq151 125 1e-22
seq2 98.7 2e-14
>seq84
Length=778094
Score = 136 bits (150), Expect = 6e-26
Identities = 93/105 (89%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 2035651 CCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTA 2035710
||||||||||||||||||||||||| |||||| | || ||||||||||| |||||| | |
Sbjct 405587 CCAACTACCTCGACATCAAGCCCCTTCTCGATGTTGGTTGCAAGACCGTCGCCAACATGA 405528
Query 2035711 TCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
||||||||||||| |||||||| ||||| ||||| || |||||||
Sbjct 405527 TCAAGGGCAAGTCTCCCGAGGAGATCCGAAAGACGTTCAACATCA 405483
>seq151
Length=1813609
Score = 125 bits (138), Expect = 1e-22
Identities = 171/237 (72%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| || || || ||| |||||| |||||||||||||| | || ||||| ||||||
Sbjct 1086615 TAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTCCATG 1086556
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027
| ||| |||||||| | | ||| ||||||| || || | | |||| || |||
Sbjct 1086555 AAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTGCCAAGTGCCACAAGAAGACGG 1086496
Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCC--GATGAGCGCCA 794085
||||| || || || ||||| || ||||||| | | ||||||||| || |||||| |
Sbjct 1086495 TCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGAGCGCAA 1086436
Query 794086 CGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCT 794142
||||| | |||| | | ||||| | |||||| | ||| || ||| |||||||||
Sbjct 1086435 --GGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATCT 1086381
>seq2
Length=1753382
Score = 98.7 bits (108), Expect = 2e-14
Identities = 167/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 2019198 CCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACTGCCTTACGTCGGCGGCC 2019257
|| || || || || ||| ||||||||||||| || |||||| || | || || | ||
Sbjct 674580 CCCCCGGGGCGACAAAAGTTGATCATCCTCGACGAAGCCGACAGCATGACATCTGGCGCG 674521
Query 2019258 CAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACGACGCGGTTTGCGCTGGCC 2019317
||||| ||||||||| ||| ||||||| || |||| || || | || || | |||
Sbjct 674520 CAGCAAGCCCTCCGACGGACGATGGAAATTTATTCCAATACCACCAGATTCGCATTCGCC 674461
Query 2019318 TGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGTTGCGCCATCTTGCGCTTT 2019377
|||||| ||| | ||||||| || | || | ||||||||| |||| | |
Sbjct 674460 TGCAACCAGTCCAACAAAATCATCGAGCCCTTACAATCGAGATGCGCCATCCTGCGATAT 674401
Query 2019378 GCGCGCCTCACCGACGCCCAGATCGCCGCGCGTCTGCGCGAGATTATCGACGCCGAAAAG 2019437
|| || ||||||||||| | | ||| ||| |||| ||||| || ||||||
Sbjct 674400 GCAAAGCTGACCGACGCCCAAGTGGTGAAGCGGTTGCTTCAGATCATCGAAGCGGAAAAG 674341
Query 2019438 GT 2019439
||
Sbjct 674340 GT 674339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916228103575508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |