Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq97 271 7e-68 seq96 113 4e-20 seq151 111 2e-19 seq1 102 8e-17 >seq97 Length=371559 Score = 271 bits (300), Expect = 7e-68 Identities = 1010/1552 (65%), Gaps = 67/1552 (4%) Strand=Plus/Minus Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319 || || ||||| ||||| || || || || || ||| | || | ||| ||| | || Sbjct 82724 TTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTATAAGGC 82665 Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379 || || | ||||| ||||||| ||||||| || | || || ||||| || | Sbjct 82664 TCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGA 82605 Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTG-CGCTTCAGAGCCGCCCAGTCCCA 148438 |||| |||||| | |||| | | || | | ||| || | | |||||||||| Sbjct 82604 AGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGA-AGGGTCTCCCAGTCCCA 82546 Query 148439 GAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCG-CGGCTAGCGGGGC 148497 || || || ||||||||||||| || |||| || || || | | | || ||| Sbjct 82545 AAGGTCGGAGGGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCAGAT-GCTGGGG 82487 Query 148498 TGCCCTCGTA-CGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCG-CCTCGAG 148555 |||| | | | || ||| || || | | || || |||| ||| | | || | Sbjct 82486 AACCCTTGAAGCTAGA-GTAAGGACCCTCCTCCTTAGCGAGTT-GCACCGAGGCCGTCAA 82429 Query 148556 CGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA---GCGCCGCCGACTCGCT 148612 || ||| |||||| ||||| || ||| |||| | | | ||| | | | Sbjct 82428 AGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGG---GGA 82372 Query 148613 TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAAT 148672 ||| | ||||| || || || || || || ||||| ||||| || || || ||||| Sbjct 82371 CTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGACACCAAT 82312 Query 148673 GGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC-GAGCGGATAGTGGTTGCGGTCGA 148731 ||| ||||| |||||| | ||| || ||| || || ||||||||| ||||| Sbjct 82311 GGGTCGGTGACGCATGTTGCTGTTGCGGGC-CTCGATGATGGGGTAGTGGTTGACGTCGA 82253 Query 148732 TGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCG 148790 | ||||||| |||| ||||| || || |||| ||| | | | ||| | || ||| Sbjct 82252 TAATCTTGTTCAAG-TTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTCTGGAAGTCG 82194 Query 148791 TAC---------TTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCAC 148841 || |||| || || | | | | || || | || || |||||||| Sbjct 82193 TAGCAGCCCTCGTTGTAGTCAACAAAGGAAGG---CAGAGCCAATGATGCGAGATTGCAA 82137 Query 148842 ACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTG---CTGCAT 148898 || || |||||| || || | |||||| | |||||| | ||| || ||| |||| Sbjct 82136 ACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGCGA 82077 Query 148899 TTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATG 148958 || | ||||| |||||| || ||||| || | |||||| ||||||||| |||||| Sbjct 82076 ATGGT---GCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTAGAGCATG 82020 Query 148959 TACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGGTCCTGCGCGC 149016 | || ||| ||||| ||| | |||| ||| | | | ||| | ||| || Sbjct 82019 AAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCA--CAGCTTCTGGGC-- 81964 Query 149017 GCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGTATAAAGTATACAGCCGCTCGA 149070 ||| || || | |||||| | ||||||| || |||||| ||||| Sbjct 81963 ---CTTCATGGTCTT-GCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAGCTTCTCGA 81908 Query 149071 ACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACA 149130 || | || ||||||||||| | || |||||||||| | ||||||||||| | ||| Sbjct 81907 ACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAGT 81848 Query 149131 CGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGT 149190 |||||| | | || |||||||| ||||||||||| | ||| || || | | | || Sbjct 81847 CGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGT 81788 Query 149191 CGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGT 149250 | || || | ||||| ||| ||| |||||| | | | || | || Sbjct 81787 CACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGT 81728 Query 149251 CCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGT 149307 | |||||||| ||||||| ||| | |||| || || |||||| |||||||||| Sbjct 81727 CGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGT 81668 Query 149308 CGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC---TGGCAG 149364 |||||| || | ||||||| || || || | |||||| |||| ||| ||| | Sbjct 81667 CGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGG---AATGACACCATTGGAGG 81611 Query 149365 TGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGA 149424 ||||||| ||| | |||| | |||| || || | | ||||||||||| |||| Sbjct 81610 TGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCGA 81551 Query 149425 TGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGATGCCCTC 149482 |||| || ||| | ||| ||||| || | |||| ||| || |||||| || || Sbjct 81550 TGCCTCCTGCCAT-CTTGGAGATCATGGCACAAGTC-TTGAGGGTGTCGTAGATACCGTC 81493 Query 149483 GATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCC 149542 ||||||||| ||||||| | ||| ||||| || ||| || || | | || || Sbjct 81492 GATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACC 81433 Query 149543 GGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACG 149601 || ||||| ||| || ||||| || || | || |||| ||| | | ||| | Sbjct 81432 CGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGG-ACATGAGGTTGTAGG 81374 Query 149602 ACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATAT 149661 ||| || || || || ||||| || || |||||| | ||||| ||||| | ||| | Sbjct 81373 TCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGCATGATCATGT 81314 Query 149662 GCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCT 149721 |||| |||||||| | | ||| | || || || | |||| ||||| |||| Sbjct 81313 GCTGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCT 81254 Query 149722 TGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773 || |||| ||||| | ||||| || || ||| | | | | ||||| | ||| Sbjct 81253 TGAAGCCGAAGTATTGGTAGTTGAAATCACGGTCATAGACGATGGCAGAGTC 81202 >seq96 Length=3495428 Score = 113 bits (124), Expect = 4e-20 Identities = 146/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || |||||||| | || ||| ||| | ||||| |||||||| | Sbjct 1450443 GGTCGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGACCA-TCCTCCAGCTGCTTAC 1450385 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || |||| || ||||||||||| || |||||||| |||||||| ||||| || Sbjct 1450384 CAGCAAAAATAAGTCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTCGACT 1450325 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | || || | | || || |||| || | || |||||||| || | Sbjct 1450324 TGACATTGTCGATAGTATCAGAAGATTCGACCTCGAGAGTAATCGTCTTGCCGGTGAGGG 1450265 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || |||||||||||||| Sbjct 1450264 TCTTGACGAAAATCTGCAT 1450246 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || || | | | ||||| |||||||| || Sbjct 1450214 GTTGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGGCCA-TCCTCAAGCTGCTTTCC 1450156 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 1450155 GGCGAAGATGAGTCGCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGAATCTTCGACTT 1450096 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | |||||| || | ||||| || || ||||||| || Sbjct 1450095 GACATTGTCGATCGTGTCGGATGACTCCACCTCAAGGGTGATAGTCTTACCGGTCAAGGT 1450036 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || || ||||| Sbjct 1450035 CTTGACAAAGATTTGCAT 1450018 Score = 96.9 bits (106), Expect = 3e-15 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| ||| | ||| ||||||||||||||| || Sbjct 1449703 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCC 1449644 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || |||||||| || ||||||||||| |||||||| |||||| ||| Sbjct 1449643 AGCGAAGATAAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTT 1449584 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 | | || | ||||| | || ||| || || | |||| ||| || || |||| Sbjct 1449583 AACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTTCCCGTCA 1449528 Score = 82.4 bits (90), Expect = 7e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||| ||||||||||| || | || || ||||| |||||||| ||||| || |||||| Sbjct 1449944 TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTG 1449885 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | || || | | ||| || |||| ||||| | Sbjct 1449884 TCCTGGATCTTCGACTTCACATTGTCGATGGTATCCGAAGACTCGACCTCGAGGGTGATG 1449825 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650 || ||||| || || || || |||| Sbjct 1449824 GTCTTGCCAGTGAGGGTCTTGACGA 1449800 >seq151 Length=1813609 Score = 111 bits (122), Expect = 2e-19 Identities = 343/519 (66%), Gaps = 15/519 (3%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || || || || ||||| || ||||| || ||||| | | || ||||| | Sbjct 1086619 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 1086560 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTA-AAGTATTTCGGCTGGCCCAACTGT-ACGAGC 120468 ||| || ||||| |||||| | || || | || | || |||| || || || Sbjct 1086559 CATGAAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTG--CCAAGTGCCACAAGA 1086502 Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528 || ||||| || |||||||| ||||| | |||| | || |||||||||||| | Sbjct 1086501 AGACGGTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGA 1086442 Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588 || |||| ||| || | ||||||| ||| |||| || || || ||| || Sbjct 1086441 GCGCAAGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATC 1086382 Query 120589 GCGAGCATAGTGTGGCCG--GGCATCTTGTGTTCGA-TGCGCGTTCGGTAGTACAGGCAC 120645 | | || | || | ||| || | ||| | || | || |||| | | || Sbjct 1086381 TCACGAATGATCTGCTTGCTGGC-TCGGTTCTTCAAGTGAGAGT---GTAGGAGA--CAG 1086328 Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705 || ||||| |||||||||||||| || || || || ||||||||| || |||| ||| Sbjct 1086327 GCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCA 1086268 Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGG-CGGCAAAGCTGCCCGAAAAGAACAC 120764 ||||||| || | |||||| |||| |||| || ||||| || ||||| | Sbjct 1086267 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGC-ACCACTGAAGAAAAT 1086209 Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGAT 120824 ||||| ||| || || || |||| |||| ||| || | | ||||| | ||| Sbjct 1086208 ACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTGGAT 1086149 Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863 |||| || ||||| |||||||| || || | ||| || Sbjct 1086148 CCACCGAATAGCCCAATCGGCCTTCTTTCGGATGCAAGG 1086110 >seq1 Length=4044527 Score = 102 bits (112), Expect = 8e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| |||| || || | | | || || ||||||||||| ||| Sbjct 542175 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCA-TCTTCAAGCTGCTTGCCGGCGA 542233 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | || || ||||||||||| || || || || |||||||| |||||| ||||| | Sbjct 542234 AGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGT 542293 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||||| | |||||| || | ||||| || || || || || || || | Sbjct 542294 TGTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 542353 Query 133648 CGAAAATCTGCAT 133660 |||| |||||||| Sbjct 542354 CGAAGATCTGCAT 542366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483419760645280