Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq97 271 7e-68
seq96 113 4e-20
seq151 111 2e-19
seq1 102 8e-17
>seq97
Length=371559
Score = 271 bits (300), Expect = 7e-68
Identities = 1010/1552 (65%), Gaps = 67/1552 (4%)
Strand=Plus/Minus
Query 148260 TTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGATACACGTTGCTCGTAAACGGT 148319
|| || ||||| ||||| || || || || || ||| | || | ||| ||| | ||
Sbjct 82724 TTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTCGAGGTATAAGGC 82665
Query 148320 TCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACC 148379
|| || | ||||| ||||||| ||||||| || | || || ||||| || |
Sbjct 82664 TCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGCATAGGGGCGAGA 82605
Query 148380 AGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTG-CGCTTCAGAGCCGCCCAGTCCCA 148438
|||| |||||| | |||| | | || | | ||| || | | ||||||||||
Sbjct 82604 AGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGA-AGGGTCTCCCAGTCCCA 82546
Query 148439 GAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCG-CGGCTAGCGGGGC 148497
|| || || ||||||||||||| || |||| || || || | | | || |||
Sbjct 82545 AAGGTCGGAGGGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCAGAT-GCTGGGG 82487
Query 148498 TGCCCTCGTA-CGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCG-CCTCGAG 148555
|||| | | | || ||| || || | | || || |||| ||| | | || |
Sbjct 82486 AACCCTTGAAGCTAGA-GTAAGGACCCTCCTCCTTAGCGAGTT-GCACCGAGGCCGTCAA 82429
Query 148556 CGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCA---GCGCCGCCGACTCGCT 148612
|| ||| |||||| ||||| || ||| |||| | | | ||| | | |
Sbjct 82428 AGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCCTCGGG---GGA 82372
Query 148613 TTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAAT 148672
||| | ||||| || || || || || || ||||| ||||| || || || |||||
Sbjct 82371 CTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGACACCAAT 82312
Query 148673 GGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTC-GAGCGGATAGTGGTTGCGGTCGA 148731
||| ||||| |||||| | ||| || ||| || || ||||||||| |||||
Sbjct 82311 GGGTCGGTGACGCATGTTGCTGTTGCGGGC-CTCGATGATGGGGTAGTGGTTGACGTCGA 82253
Query 148732 TGATCTTGT-CAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCG 148790
| ||||||| |||| ||||| || || |||| ||| | | | ||| | || |||
Sbjct 82252 TAATCTTGTTCAAG-TTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTCTGGAAGTCG 82194
Query 148791 TAC---------TTGTCATCTACGATGCATCGGTTCACGGCGATAGAGGCTAGATTGCAC 148841
|| |||| || || | | | | || || | || || ||||||||
Sbjct 82193 TAGCAGCCCTCGTTGTAGTCAACAAAGGAAGG---CAGAGCCAATGATGCGAGATTGCAA 82137
Query 148842 ACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTG---CTGCAT 148898
|| || |||||| || || | |||||| | |||||| | ||| || ||| ||||
Sbjct 82136 ACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTTGGAACTGCGA 82077
Query 148899 TTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATG 148958
|| | ||||| |||||| || ||||| || | |||||| ||||||||| ||||||
Sbjct 82076 ATGGT---GCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTAGAGCATG 82020
Query 148959 TACGGTCCGCCAGTTTCCACCTGCGTTTCCACTATG--AACCGATGCAGGTCCTGCGCGC 149016
| || ||| ||||| ||| | |||| ||| | | | ||| | ||| ||
Sbjct 82019 AAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCA--CAGCTTCTGGGC-- 81964
Query 149017 GCACTTGCTGCTCGTAGCGACCCT------CCTGCTCGTATAAAGTATACAGCCGCTCGA 149070
||| || || | |||||| | ||||||| || |||||| |||||
Sbjct 81963 ---CTTCATGGTCTT-GCGACCTTTGCCAGCCTGCTCATACTTCTCGTACAGCTTCTCGA 81908
Query 149071 ACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAGCGACCACA 149130
|| | || ||||||||||| | || |||||||||| | ||||||||||| | |||
Sbjct 81907 ACTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAGT 81848
Query 149131 CGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTACATGAGGT 149190
|||||| | | || |||||||| ||||||||||| | ||| || || | | | ||
Sbjct 81847 CGCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGT 81788
Query 149191 CGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCTGAATATGT 149250
| || || | ||||| ||| ||| |||||| | | | || | ||
Sbjct 81787 CACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGT 81728
Query 149251 CCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGCTTG---CCGCCCTGGT 149307
| |||||||| ||||||| ||| | |||| || || |||||| ||||||||||
Sbjct 81727 CGGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGT 81668
Query 149308 CGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC---TGGCAG 149364
|||||| || | ||||||| || || || | |||||| |||| ||| ||| |
Sbjct 81667 CGACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGG---AATGACACCATTGGAGG 81611
Query 149365 TGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGACGCCGA 149424
||||||| ||| | |||| | |||| || || | | ||||||||||| ||||
Sbjct 81610 TGCCGTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGAGACCGA 81551
Query 149425 TGCCGCC-GCCGTACTTTGAGATGGCCGCGC-AGTCGCCGAGCGTCGAGTAGATGCCCTC 149482
|||| || ||| | ||| ||||| || | |||| ||| || |||||| || ||
Sbjct 81550 TGCCTCCTGCCAT-CTTGGAGATCATGGCACAAGTC-TTGAGGGTGTCGTAGATACCGTC 81493
Query 149483 GATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCGTGCC 149542
||||||||| ||||||| | ||| ||||| || ||| || || | | || ||
Sbjct 81492 GATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACC 81433
Query 149543 GGCCGCGAACATGGTGGGGCTGGCGTGTGT-AAAATATTTCTGGCTCATCATCTCGTACG 149601
|| ||||| ||| || ||||| || || | || |||| ||| | | ||| |
Sbjct 81432 CGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGG-ACATGAGGTTGTAGG 81374
Query 149602 ACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCATAT 149661
||| || || || || ||||| || || |||||| | ||||| ||||| | ||| |
Sbjct 81373 TCTCCAGGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGCATGATCATGT 81314
Query 149662 GCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTGTCT 149721
|||| |||||||| | | ||| | || || || | |||| ||||| ||||
Sbjct 81313 GCTGAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCT 81254
Query 149722 TGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGCGGCGTC 149773
|| |||| ||||| | ||||| || || ||| | | | | ||||| | |||
Sbjct 81253 TGAAGCCGAAGTATTGGTAGTTGAAATCACGGTCATAGACGATGGCAGAGTC 81202
>seq96
Length=3495428
Score = 113 bits (124), Expect = 4e-20
Identities = 146/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521
||| ||||| ||||| || |||||||| | || ||| ||| | ||||| |||||||| |
Sbjct 1450443 GGTCGACTCCTTCTGAATGTTGTAATCACTCAGGGTGCGACCA-TCCTCCAGCTGCTTAC 1450385
Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581
| || |||| || ||||||||||| || |||||||| |||||||| ||||| ||
Sbjct 1450384 CAGCAAAAATAAGTCGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTTGAATCTTCGACT 1450325
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
||| | || | || || | | || || |||| || | || |||||||| || |
Sbjct 1450324 TGACATTGTCGATAGTATCAGAAGATTCGACCTCGAGAGTAATCGTCTTGCCGGTGAGGG 1450265
Query 133642 TTTTTACGAAAATCTGCAT 133660
| || ||||||||||||||
Sbjct 1450264 TCTTGACGAAAATCTGCAT 1450246
Score = 102 bits (112), Expect = 8e-17
Identities = 143/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| || || | | | ||||| |||||||| ||
Sbjct 1450214 GTTGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGGCCA-TCCTCAAGCTGCTTTCC 1450156
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | ||||| ||||||||||| || ||||| || ||||| || ||||| |||
Sbjct 1450155 GGCGAAGATGAGTCGCTGCTGGTCTGGGGGGATACCCTCCTTATCCTGAATCTTCGACTT 1450096
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | || | |||||||| | |||||| || | ||||| || || ||||||| ||
Sbjct 1450095 GACATTGTCGATCGTGTCGGATGACTCCACCTCAAGGGTGATAGTCTTACCGGTCAAGGT 1450036
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || || || |||||
Sbjct 1450035 CTTGACAAAGATTTGCAT 1450018
Score = 96.9 bits (106), Expect = 3e-15
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Minus
Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522
||||||||| ||||| || ||||| ||| | ||| ||||||||||||||| ||
Sbjct 1449703 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCGAGCTGCTTTCC 1449644
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| | || || |||||||| || ||||||||||| |||||||| |||||| |||
Sbjct 1449643 AGCGAAGATAAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGACTT 1449584
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
| | || | ||||| | || ||| || || | |||| ||| || || ||||
Sbjct 1449583 AACGTTGTCGATGGTGTCCGAGGACTCGACCTCAAGAGTGATGGTCTTTCCCGTCA 1449528
Score = 82.4 bits (90), Expect = 7e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
||||| ||||||||||| || | || || ||||| |||||||| ||||| || ||||||
Sbjct 1449944 TCCTCAAGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTG 1449885
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||| | | || | || || | | ||| || |||| ||||| |
Sbjct 1449884 TCCTGGATCTTCGACTTCACATTGTCGATGGTATCCGAAGACTCGACCTCGAGGGTGATG 1449825
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGA 133650
|| ||||| || || || || ||||
Sbjct 1449824 GTCTTGCCAGTGAGGGTCTTGACGA 1449800
>seq151
Length=1813609
Score = 111 bits (122), Expect = 2e-19
Identities = 343/519 (66%), Gaps = 15/519 (3%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || || || || ||||| || ||||| || ||||| | | || ||||| |
Sbjct 1086619 CTGGTAATCACCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGGGAGATGTTCTC 1086560
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTA-AAGTATTTCGGCTGGCCCAACTGT-ACGAGC 120468
||| || ||||| |||||| | || || | || | || |||| || || ||
Sbjct 1086559 CATGAAGTCGAAGGGGTTGGCAGACTTGTAAATCTTCTCGTTG--CCAAGTGCCACAAGA 1086502
Query 120469 AGTCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAAC 120528
|| ||||| || |||||||| ||||| | |||| | || |||||||||||| |
Sbjct 1086501 AGACGGTCGGCAACAAACTCGATGTATTGCTTCATGAGGTCCGAGTTCATGCCCAGAAGA 1086442
Query 120529 GCCACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATG 120588
|| |||| ||| || | ||||||| ||| |||| || || || ||| ||
Sbjct 1086441 GCGCAAGGCAGTGCCTCGGTCAGGAACTCCTGCTCGATGTTGACAGCGTCGGTGATGATC 1086382
Query 120589 GCGAGCATAGTGTGGCCG--GGCATCTTGTGTTCGA-TGCGCGTTCGGTAGTACAGGCAC 120645
| | || | || | ||| || | ||| | || | || |||| | | ||
Sbjct 1086381 TCACGAATGATCTGCTTGCTGGC-TCGGTTCTTCAAGTGAGAGT---GTAGGAGA--CAG 1086328
Query 120646 GCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCG 120705
|| ||||| |||||||||||||| || || || || ||||||||| || |||| |||
Sbjct 1086327 GCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAAGCCA 1086268
Query 120706 GGCATGATGCCTTTCGTCTTGATGTAGAATATGG-CGGCAAAGCTGCCCGAAAAGAACAC 120764
||||||| || | |||||| |||| |||| || ||||| || ||||| |
Sbjct 1086267 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGC-ACCACTGAAGAAAAT 1086209
Query 120765 GCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTGTCGAT 120824
||||| ||| || || || |||| |||| ||| || | | ||||| | |||
Sbjct 1086208 ACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTGGAT 1086149
Query 120825 CCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGG 120863
|||| || ||||| |||||||| || || | ||| ||
Sbjct 1086148 CCACCGAATAGCCCAATCGGCCTTCTTTCGGATGCAAGG 1086110
>seq1
Length=4044527
Score = 102 bits (112), Expect = 8e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527
||| ||||| || ||||| |||| || || | | | || || ||||||||||| |||
Sbjct 542175 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCA-TCTTCAAGCTGCTTGCCGGCGA 542233
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
| || || ||||||||||| || || || || |||||||| |||||| ||||| |
Sbjct 542234 AGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGT 542293
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647
|| | ||||||| | |||||| || | ||||| || || || || || || || |
Sbjct 542294 TGTCGATAGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 542353
Query 133648 CGAAAATCTGCAT 133660
|||| ||||||||
Sbjct 542354 CGAAGATCTGCAT 542366
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483419760645280
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