Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq96 131 2e-25
seq97 107 2e-18
seq1 96.9 4e-15
>seq96
Length=3495428
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || || || ||||| ||||||||||| || |
Sbjct 1450472 CCGCCACGGAGACGGAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCACTC 1450413
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| || || || ||||| || || |||||||| | |||||||| || || ||
Sbjct 1450412 AGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAATAAGTCGCTGCTGGTCTGGGGGG 1450353
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || |||||||| || ||||| ||| | || || || ||||| ||
Sbjct 1450352 ATGCCCTCCTTGTCTTGAATCTTCGACTTGACATTGTCGATAGTATCAGAAGATTCGACC 1450293
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||||||||| || || ||||| | || || |||||||| |||||
Sbjct 1450292 TCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 1450246
Score = 105 bits (116), Expect = 7e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | ||| || | |||||||| || ||||| ||||| || ||||||||||||
Sbjct 1449732 CCTCCACGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1449673
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| |||||||| || || || || || | ||||||||||| || ||
Sbjct 1449672 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATAAGGCGCTGCTGATCCGGAGGG 1449613
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || ||| | ||||| || || || ||
Sbjct 1449612 ATGCCCTCCTTGTCCTGGATCTTCGACTTAACGTTGTCGATGGTGTCCGAGGACTCGACC 1449553
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|| ||||| ||||| || || ||
Sbjct 1449552 TCAAGAGTGATGGTCTTTCCCGT 1449530
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
||||| | || ||||| || || || ||||| || |||||||||||| | ||| |
Sbjct 1450235 AGTCGGAGAACAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAAGGTACGG 1450176
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| || || || || || | |||||||| || || || || || ||
Sbjct 1450175 CCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCGCTGCTGGTCTGGGGGGATACCCTCC 1450116
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| || ||||| ||| | |||||||| || ||||| || || ||
Sbjct 1450115 TTATCCTGAATCTTCGACTTGACATTGTCGATCGTGTCGGATGACTCCACCTCAAGGGTG 1450056
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || |||||||| || || || || || ||||||||
Sbjct 1450055 ATAGTCTTACCGGTCAAGGTCTTGACAAAGATTTGCAT 1450018
Score = 93.3 bits (102), Expect = 4e-14
Identities = 140/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|||||||| || || ||||||||||| |||||||||||| | ||| | || ||
Sbjct 1449998 ACGAGGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCA 1449939
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| ||||| ||||| |||| ||||| || ||||| || || || || || || ||
Sbjct 1449938 AGCTGCTTGCCAGCAAAGATCAGGCGCTGTTGGTCGGGGGGGATACCCTCCTTGTCCTGG 1449879
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || || || ||| | || || || || || || ||||| || ||||| ||
Sbjct 1449878 ATCTTCGACTTCACATTGTCGATGGTATCCGAAGACTCGACCTCGAGGGTGATGGTCTTG 1449819
Query 134685 CCGGTTAAAGTTTTAACGA 134703
|| || | || || ||||
Sbjct 1449818 CCAGTGAGGGTCTTGACGA 1449800
>seq97
Length=371559
Score = 107 bits (118), Expect = 2e-18
Identities = 542/857 (63%), Gaps = 15/857 (2%)
Strand=Plus/Plus
Query 7555 GAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGAC 7614
|| ||| ||| |||||| | |||| || || || ||||| || || ||||| ||
Sbjct 81301 GAGCGACCTCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGTGACGACATCGAG 81360
Query 7615 GCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACC 7674
| | |||| || ||| | | ||||| || | ||| || |||||||| || |||
Sbjct 81361 CGTGTCCTGGAGACCTACAACCTCATGTCCAGCAAGCTGTTCACTCACGCTTCACCAACC 81420
Query 7675 ATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGC 7734
|||| ||||| || |||||| |||| || || || || | ||||
Sbjct 81421 CTGTTCAATGCGGGTACCCCTCAGCCTCAGCTGTCTTCCTGCTTCCTGGTTGACATGAAG 81480
Query 7735 GAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATA 7793
||||||||||||||||| || ||| |||| || | || ||| |||| || ||| || |
Sbjct 81481 GAAGACAGCATCGACGGTATCTACGACACCCT-CAAGACTTGTGCCATGATCTCC-AAGA 81538
Query 7794 CGGC-GGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGT 7852
||| || || || ||||| ||||| || | || |||| ||| ||| |
Sbjct 81539 TGGCAGGAGGCATCGGTCTCAACGTGCACCGAATCCGTGCCACCGGCTCTTACATTGCCG 81598
Query 7853 CCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGC 7912
|||||||| | ||| ||| | || ||| | || || ||||| ||| | | |
Sbjct 81599 GTACCAACGGCACCTCCAATGGTGTCATTCCTATGCTCCGTGTCTTCAACAACACTGCTC 81658
Query 7913 GACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGT 7969
|| | || |||||||| || ||||| || || ||||| || | ||||| |
Sbjct 81659 GATACGTCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATTTACCTTGAGCCCT 81718
Query 7970 GGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAGCA 8029
||||||| ||| ||| | | | | ||||||| ||| || ||||| |
Sbjct 81719 GGCACGCCGACGTTTTTGAATTCTTGGATCTGCGCAAGAACCACGGCAAGGAAGAAGCCC 81778
Query 8030 AAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATT 8089
|| || || | ||||| | ||||| | ||||||||||| |||| ||| || |
Sbjct 81779 GCGCTCGTGACTTGTTCTTGGCCCTGTGGATCCCCGATCTGTTCATGAAGCGTGTCGAGA 81838
Query 8090 TCGACGCACAATGGTCGCTCATGTGCCCCGATCGTTGCCCTTTATTAAAAAACGTTTACG 8149
||| | ||| | |||||||||||| || ||||| | | ||||
Sbjct 81839 AGAACGGCGACTGGACTCTCATGTGCCCCAATGAGTGCCCCGGGCTTGCTGATTGCTACG 81898
Query 8150 GTTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGGCAAG 8209
|| | || || | ||||| | | || || || ||| | | | |||||
Sbjct 81899 GTGATGAGTTCGAGAAGCTGTACGAGAAGTATGAGCA----GGCTGGCAAAGGTCGCAAG 81954
Query 8210 ----TGAAAGCGCGCGACCTGCACCGCGCCATTATCGAATGTCAAAACGAAACCGGTATG 8265
|||| || | | ||| ||||| | || ||| | ||||||||| |
Sbjct 81955 ACCATGAAGGCCCAGAAGCTGTGGTATGCCATCTTGGAGGCTCAGACCGAAACCGGCAAC 82014
Query 8266 CCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACC 8325
|| | |||||| ||||| ||| |||||| |||||||| || | ||| ||||||||
Sbjct 82015 CCTTTCATGCTCTACAAGGACAGCTGCAACCGTAAAAGCAACCAGAAGAACCTGGGCACC 82074
Query 8326 ATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCC 8385
||| | | ||| || ||| |||| || | ||||| | || ||||| || || ||
Sbjct 82075 ATTCGCAGTTCCAACCTTTGCACTGAGATCATCGAGTACTGTGCTCCCGATGAGGTCGCT 82134
Query 8386 GTTTGCAATCTAGCGTC 8402
||||||||||| || ||
Sbjct 82135 GTTTGCAATCTCGCATC 82151
>seq1
Length=4044527
Score = 96.9 bits (106), Expect = 4e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| ||||| || ||| ||||| || |||||||||||||
Sbjct 542140 CCACCACGGAGGCGGAGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 542199
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||| || || || | |||||||| || || ||
Sbjct 542200 AGGGTTCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 542259
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | |||||||| || |||||
Sbjct 542260 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCCACC 542319
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || || || || || || | || || ||||| || ||||| |||
Sbjct 542320 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTG 542370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505397313393440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |