Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 95.1 1e-14 >seq1 Length=4044527 Score = 95.1 bits (104), Expect = 1e-14 Identities = 219/327 (67%), Gaps = 11/327 (3%) Strand=Plus/Minus Query 19426 CCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAA 19485 |||||||| || | || ||||| ||| | | || || || || ||| ||||||||| Sbjct 712794 CCTCCCAAGGTTATCAACGGTCCCGAAGTGCTCAACAAGTACGTTGGTGCATCGGAAGAG 712735 Query 19486 AATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AG 19544 || | ||| |||||||| || || || |||| | | || | |||| | | || Sbjct 712734 AACATCCGAAAGTTGTTTGCAGATGCCGA-GAAGGAGTACAAGGAGAAGGGGGATGAGAG 712676 Query 19545 TTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG 19604 | ||| ||||| || || | ||||| |||||||| | || || ||| ||||||| || Sbjct 712675 TAGTTTACACATCATCATCTTCGATGAGTTGGACGCTGTGTGCAAACAACGAGGTTCAGG 712616 Query 19605 ---TGTA------AATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGA 19655 || | | |||||| ||||| || || ||||| || || || ||| | || Sbjct 712615 CGCTGGAGGCGGCACTGGAGTCGGTGACAGCGTGGTGAATCAGCTTCTATCCAAACTTGA 712556 Query 19656 CGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAAT 19715 ||||| |||| || || |||||| | | || || ||||| || || ||| | || Sbjct 712555 TGGTGTGGACCAGCTCAACAATATTCTTTTGATCGGAATGACCAACCGAAAGGACATGAT 712496 Query 19716 AGACAGCGCCTTATTACGACCCGGTCG 19742 ||| || | || ||||||||||| Sbjct 712495 CGACGATGCGCTGTTGCGACCCGGTCG 712469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455166832860