Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01] 172 sequences; 44,950,817 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq97 399 2e-106 seq151 118 1e-21 >seq97 Length=371559 Score = 399 bits (442), Expect = 2e-106 Identities = 1146/1741 (66%), Gaps = 61/1741 (4%) Strand=Plus/Minus Query 78199 TAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGACAGCTTG 78258 ||||||||||| ||||||||||| |||||| || | |||||| || | | |||| Sbjct 83024 TAGTACATGCCGGTCTTGAGACCGAGCTTCCAGCCTGCGAAGTGCATGCTGGTGATCTTG 82965 Query 78259 GCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTACGCACCG 78318 ||| | |||| | |||| ||||||||| ||||| ||||| |||||| | ||||| Sbjct 82964 CCCATTGTGGGGTCTTTCATGTGGATGTTGAGGGACTGAGACTGATCGATGAAGGCACCA 82905 Query 78319 CGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGGTAAATG 78378 || ||||| | ||| | || |||| ||| | ||||||||| | ||| ||| | Sbjct 82904 CGATCGGCGGACATTTGGAGGACCTGGCGTTGGGAAATCTCCCACACCGTCTTGTAGAGC 82845 Query 78379 GCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGG-CTCGCACA--A 78433 | ||| | || ||| | |||| || | | || | | | |||| ||| | | | Sbjct 82844 GACTTAATGTCGTCCGGAATGTT-AGGGAT-GTTCTGGATAGAACCGTTCTCAGAAATGA 82787 Query 78434 TTTCATTCTTAATTTGAGGGTTCC-------AGCGATTGATCTTCTGAAGATCCCGGACC 78486 | ||||| || || ||| ||| | |||| | || ||| | Sbjct 82786 TGCGGTTCTTCAT----GGCATCCGACCACAAGCCCAT-ATCTACC--AGGTCCTT---C 82737 Query 78487 AGGTGCC---GGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTG 78543 | | ||| |||||| | |||||| || || ||| |||||| |||||||||| Sbjct 82736 AAGAGCCAGGGGTTAACAACCTGGAACTCACCAGCAAGGACACGGCGCTGGTAGATGTTC 82677 Query 78544 GTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGC 78603 | || || |||||||| ||||| || |||| |||||| | || ||| || ||| Sbjct 82676 GAGGTATAAGGCTCGAAGCATTCGTTATTGCCCAGGATCTGCGAAGTACTGGCAGTAGGC 82617 Query 78604 ATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTTAGG--- 78660 || || |||| || | || |||| ||| ||| ||| | || | ||| Sbjct 82616 ATAGGGGCGAGAAGCAAGCTGTTGCGAATACCGTGCTCCTTAACCTGCTCGCGAAGGGTC 82557 Query 78661 ---CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATACCCTCG 78717 | |||||||| || | | | |||||| || || ||||||||||| Sbjct 82556 TCCCAGTCCCAAAGGTCGGAGGGCTTCACGTTCCACATATCAAACTGGAGGATACCCTCA 82497 Query 78718 GACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT-GA 78776 || || || || |||||||| | ||||| ||||||||||| ||||||| ||| || Sbjct 82496 GATGCTGGGGAACCCTTGAAGCTAGAGTAAGGACCCTCCTCCTTAGCGAGTT-GCACCGA 82438 Query 78777 CTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTT 78836 | || || |||||||| | | ||| ||||| |||||| | ||| || |||| Sbjct 82437 GGCCGTCAAAGCAGCGTGGTAAATGGTCTCAAAGATCTGCTTGTTCAACTCACGAGCCTC 82378 Query 78837 GGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGAT 78896 || ||||| | | || || || |||| |||| || || |||||||| |||| Sbjct 82377 GGGGGACTCGAAGGGCATGCGAAGAGCCAGGAAGGCATCAGCAAGACCCTGGACACCGAC 82318 Query 78897 AGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCG 78956 | | || |||||||| ||||||||||| || |||||| | | | ||||| ||| Sbjct 82317 ACCAATGGGTCGGTGACGCATGTTGCTGTTGCGGGCCTCGATGATGGGGTAGTGGTTGAC 82258 Query 78957 ATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAA 79016 ||||| | ||||| ||| || ||| ||| | || ||||||| | || ||| Sbjct 82257 GTCGATAATCTTGTTCAAGTTGCGGACGACAACCTGTGTGACCTCGTGTAGCTTCTGGAA 82198 Query 79017 ATCAAAAT-GATTTCCTTTGA-TGAAAGTCGGTAGGCACAGC----GATGCCAGGTTGCA 79070 || | | || || | | || || ||||| ||| ||||| || ||||| Sbjct 82197 GTCGTAGCAGCCCTCGTTGTAGTCAACAAAGGAAGGCAGAGCCAATGATGCGAGATTGCA 82138 Query 79071 CACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTT 79130 || || ||| || || | | ||||||||| || ||||| | || || ||| Sbjct 82137 AACAGCGACCTCATCGGGAGCACAGTACTCGATGATCTCAGTGCAAAGGTTGGA--ACTG 82080 Query 79131 G--ATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATG 79188 |||||||| | ||||||||||||||| || ||| ||| |||||||||| |||| Sbjct 82079 CGAATGGTGCCCAGGTTCTTCTGGTTGCTTTTACGGTTGCAGCTGTCCTTGTAGAGCATG 82020 Query 79189 TACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGG 79248 | || | ||||| || |||| || | | | | | ||| | | | ||||| Sbjct 82019 AAAGGGTTGCCGGTTTCGGTCTGAGCCTCCAAGATGGCATACCACAGCTTCTGGGCCTTC 81960 Query 79249 ACAACCTTCTTGTACCGACCCTGTGCGA-------CGTACGTCCGGTACAACTCGTTGAA 79301 | ||||| ||||| | ||| | | ||| || ||||| || | ||| Sbjct 81959 ATGG---TCTTG---CGACCTT-TGCCAGCCTGCTCATACTTCTCGTACAGCTTCTCGAA 81907 Query 79302 AGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTC 79361 | || || ||| ||| | || || |||||||| | |||||||| || |||||| Sbjct 81906 CTCATCACCGTAGCAATCAGCAAGCCCGGGGCACTCATTGGGGCACATGAGAGTCCAGTC 81847 Query 79362 CTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTC 79421 ||| |||||| || || |||||| || || ||||||||||||||| ||| | ||| Sbjct 81846 GCCGTTCTTCTCGACACGCTTCATGAACAGATCGGGGATCCACAGGGCCAAGAACAAGTC 81787 Query 79422 GCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTC 79481 || || || || | ||| |||||| ||||| || | || || | | ||| Sbjct 81786 ACGAGCGCGGGCTTCTTCCTTGCCGTGGTTCTTGCGCAGATCCAAGAATTCAAAAACGTC 81727 Query 79482 GGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTT 79541 ||||||||| ||||| || || |||||||| | ||| |||||| ||||||||||| Sbjct 81726 GGCGTGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTC 81667 Query 79542 GACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCC 79601 |||||| || || ||||||||||| || |||||||| || | || || | || | ||| Sbjct 81666 GACGTATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTGCC 81607 Query 79602 GTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGC 79660 ||| || ||| || | ||| | || || || | | ||| || || ||||||| Sbjct 81606 GTTGGTACCGGCAATGTAAGAGCCGGTGGCACGGAT-TCGGTGCACGTTGAGACCGATGC 81548 Query 79661 CCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCG 79720 | || | | ||||||||| || || |||||| || |||||||| || ||||| Sbjct 81547 CTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGC 81488 Query 79721 AGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGT 79780 ||| |||||||| | |||||||||||| |||| ||| || | ||||| || | Sbjct 81487 TGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCAT 81428 Query 79781 TGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCT 79840 |||| ||||| || | ||||| ||||| | ||| | ||| || | ||| |||||| Sbjct 81427 TGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCA 81368 Query 79841 TGACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGAAGAGGTACTGGG 79900 ||| ||| || |||||| || ||||||||| ||||| ||||||| | || ||| | Sbjct 81367 GGACACGCTCGATGTCGTCACCCCAGATGCCGACAGCGACACGCATGATCATGTGCTGAG 81308 Query 79901 G 79901 | Sbjct 81307 G 81307 Score = 336 bits (372), Expect = 2e-87 Identities = 939/1420 (66%), Gaps = 38/1420 (3%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| || | ||||||| ||||| ||||||||| || |||||| || ||| ||| Sbjct 81307 CCTCAGCACATGATCATGCGTGTCGCTGTCGGCATCTGGGGTGACGACATCGAGCGTGTC 81366 Query 19163 CGCGAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 | ||||| ||| |||| ||| |||| ||| | ||||| ||||| | || ||||| || Sbjct 81367 CTGGAGACCTACAACCTCATGT-CCAGCAAGCTGTTCACTCACGCTTCACCAACCCTGTT 81425 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 ||| || ||||| | || ||| |||| ||| ||||| || | |||||||| || Sbjct 81426 CAATGCGGGTACCCCTCAGCCTCAGCTGTCTTCCTGCTTCCTGGTTGACATGAAGGAAGA 81485 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 |||||| || || |||||||| || |||||| || || ||||||||| | | || Sbjct 81486 CAGCATCGACGGTATCTACGACACCCTCAAGACTTGTGCCATGATCTCCAAGATGGCAGG 81545 Query 19342 GGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGA 19400 || ||||| || || ||| | | ||||| | | || | || || || | Sbjct 81546 AGGCATCGGTCTCAACGTGCACCGA-ATCCGTGCCACCGGCTCTTACATTGCCGGTACCA 81604 Query 19401 ACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACG 19460 |||| || | ||| || | || |||||||| |||||||||||||| || | |||| Sbjct 81605 ACGGCACCTCCAATGGTGTCATTCCTATGCTCCGTGTCTTCAACAACACTGCTCGATACG 81664 Query 19461 TCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACG 19520 || ||||||| ||| ||| || || | |||||||| ||||| ||||| ||||||| Sbjct 81665 TCGACCAGGGCGGCAACAAGCGACCCGGTGCTTTCGCCATTTACCTTGAGCCCTGGCACG 81724 Query 19521 CGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC 19580 | ||||| | || ||| | || |||||| |||||| || | || || ||| || Sbjct 81725 CCGACGTTTTTGAATTCTTGGATCTGCGCAAGAACCACGGCAAGGAAGAAGCCCGCGCTC 81784 Query 19581 GCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACG 19640 | ||| | ||| |||| ||||||| || || || |||||| || || |||||| ||| Sbjct 81785 GTGACTTGTTCTTGGCCCTGTGGATCCCCGATCTGTTCATGAAGCGTGTCGAGAAGAACG 81844 Query 19641 AAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGG 19700 || ||| || |||||||| | || ||||| || || | || |||||| || | Sbjct 81845 GCGACTGGACTCTCATGTGCCCCAATGAGTGCCCCGGGCTTGCTGATTGCTACGGTGATG 81904 Query 19701 CGTTCAATGAGTTGTACCGGACTTACGTAGCCCAG---GGC--CGGT-TCAAGAAGGTGG 19754 |||| | || ||||| || || | || ||| ||| ||| ||||| || Sbjct 81905 AGTTCGAGAAGCTGTACGAGAAGTATG-AG--CAGGCTGGCAAAGGTCGCAAGACCATG- 81960 Query 19755 TCCGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGT 19814 ||||| | | | ||| | | || | | ||| ||| ||||||| || | Sbjct 81961 --AAGGCCCAGAAGCTGTGGTATGCCATCTTGGAGGCTCAGACCGAAACCGGCAACCCTT 82018 Query 19815 ACATGTGCTACAAGGAC-GCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGAT- 19872 |||| |||||||||| || || | || || | || ||||||||| | ||| | || Sbjct 82019 TCATGCTCTACAAGGACAGCTGCAACCGTAAAAGC-AACCAGAAGAACCTGGGCACCATT 82077 Query 19873 -CAAGTCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCG 19931 ||| |||||||| || ||||| ||||| ||| | || || ||| || | Sbjct 82078 CGCAGT--TCCAACCTTTGCACTGAGATCATCGAGTACTGTGCTCCCGATGAGGTCGCTG 82135 Query 19932 TGTGTAATCTGGCGTCCCTGTGCCTGCCGACTTTCGT------CAAGGCCTCCTCCTTCG 19985 | || ||||| || || || ||||| | || || ||| | || || || Sbjct 82136 TTTGCAATCTCGCATCATTGGCTCTGCCTTCCTTTGTTGACTACAACGAGGGCTGCTACG 82195 Query 19986 ACTTTGCCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCG 20045 |||| || | ||||||| || | ||| ||| || || |||| | |||| Sbjct 82196 ACTTCCAGAAGCTACACGAGGTCACACAGGTTGTCGTCCGCAACTTGAACAAGATTATCG 82255 Query 20046 ATCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCG 20105 | ||| ||||| | | | ||| ||||| || ||||| ||||| || || | Sbjct 82256 ACGTCAACCACTACCCCATCATCGAGGCCCGCAACAGCAACATGCGTCACCGACCCATTG 82315 Query 20106 CGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATC 20165 |||| |||||||| || || || | ||| || || || | | ||||| | Sbjct 82316 GTGTCGGTGTCCAGGGTCTTGCTGATGCCTTCCTGGCTCTTCGCATGCCCTTCGAGTCCC 82375 Query 20166 CCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGG 20225 || |||| || ||| | |||||| ||||| ||| || | |||||||| || | || Sbjct 82376 CCGAGGCTCGTGAGTTGAACAAGCAGATCTTTGAGACCATTTACCACGCTGCTTTGACGG 82435 Query 20226 AATC-GTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCG 20284 || |||| ||||||| || ||||| || || ||| | |||||||| || || || Sbjct 82436 CCTCGGTGC-AACTCGCTAAGGAGGAGGGTCCTTACTCTAGCTTCAAGGGTTCCCCAGCA 82494 Query 20285 TCCGAGGGTATCCTCCAGCCGGACATGTGGGGCGT----CACTGAGA---ATGAGTTTTG 20337 || ||||||||||||||| || |||||| ||| | || || || | | | Sbjct 82495 TCTGAGGGTATCCTCCAGTTTGATATGTGGAACGTGAAGCCCTCCGACCTTTGGGACTGG 82554 Query 20338 GAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCC 20397 ||| |||| | || | ||| ||||| |||||||| ||||| |||| || Sbjct 82555 GAG-ACCCTTCGCGAGCAGGTTAAGGAGCACGGTATTCGCAACAGCTTGCTTCTCGCCCC 82613 Query 20398 CATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACAC 20457 ||||| || ||| || | |||||| |||| || ||||| |||||||| || || Sbjct 82614 TATGCCTACTGCCAGTACTTCGCAGATCCTGGGCAATAACGAATGCTTCGAGCCTTATAC 82673 Query 20458 GACCAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTC 20497 | ||||||||| ||| ||| || || ||||||||| Sbjct 82674 CTCGAACATCTACCAGCGCCGTGTCCTTGCTGGTGAGTTC 82713 >seq151 Length=1813609 Score = 118 bits (130), Expect = 1e-21 Identities = 312/462 (68%), Gaps = 22/462 (5%) Strand=Plus/Plus Query 59968 CATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCT 60027 |||| ||||| || ||||| | ||||| || ||| || || || |||||| ||| Sbjct 1086165 CATCTTTTGCCCAGCGTCTGGTTGCTTTCGCTGCCGTTGAGGGTATTTTCTTCAGTGGTG 1086224 Query 60028 CGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCA 60087 | ||| | || ||||||||||| |||||||| |||||||| ||| ||| ||||||| Sbjct 1086225 CTTTCGCGTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCTGGCTTGACATTCTCCA 1086284 Query 60088 ACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTTTGCAGTGACGCTCTATTCAC 60147 ||||||| ||||| || || |||||||| || || || || || | | ||| ||| Sbjct 1086285 ACGAGCTCATTTCTCGTGATGAGGGCCTGCACACCGACTTCGC-CTGTCTC-CTA--CAC 1086340 Query 60148 AC-CTATTGGAAAAATGCCCTTCCAAG--GAT-ATTCACAAGATTGTTCAGTGGGCTTGT 60203 | | ||| | || | | |||| ||| |||| ||| | ||| | ||| Sbjct 1086341 TCTCACTTGAAGAACCGAGCCAGCAAGCAGATCATTCGTGAGA-TCATCACCGACGCTGT 1086399 Query 60204 GAA-GTGGAGAGCGAGTTCATCACAGAAGCGCTTCCATGCAAACTCATAGGTATGGACGC 60262 || | ||| |||||| | || || || || || ||| || | || ||| || | Sbjct 1086400 CAACATCGAGCAGGAGTTCCTGACCGAGGCACTGCCTTGCGCTCTTCTGGGCATGAACTC 1086459 Query 60263 TGGAGAAATGACGCAGTACATTCAGTTTGTCGCGGACCG-CCTCATGGCCCAGTTTG--- 60318 | |||| ||| ||||| ||||||| || ||||| | || || || || | Sbjct 1086460 GGACCTCATGAAGCAATACATCGAGTTTGTTGCCGACCGTCTTCTTGTGGCACTTGGCAA 1086519 Query 60319 -GAGAAGGACCAATTTAC-GGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTT 60376 |||||| |||||| | || ||||| ||||||| ||||||| |||||| | Sbjct 1086520 CGAGAAG-----ATTTACAAGTCTG-CCAACCCCTTCGACTTCATGGAGAACATCTCCCT 1086573 Query 60377 GGAAGGGAAGACCAACTTCTTTGAGAAGCGGGTCGGGGATTA 60418 | || |||||||||||||| |||||||| || || ||||| Sbjct 1086574 TGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTA 1086615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523620671680