Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305505.1_202015-10-01]
172 sequences; 44,950,817 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 5e-17
>seq1
Length=4044527
Score = 102 bits (112), Expect = 5e-17
Identities = 158/223 (71%), Gaps = 2/223 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| || | ||||| || |||||||||||||| || ||||| || || || |||||
Sbjct 542149 AGGCGGAGCACCAGGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGTTCGG 542208
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| |||||||| || || ||||| || || | ||||| |||||||| || | |||||||
Sbjct 542209 CCATCTTCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCC 542268
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||| || | || ||| | || ||||| |||||| || | |||
Sbjct 542269 TTGTCCTGGATC-TTGGACTTGACGTTGTCGATAGTGTCGGAAGACTCCACCTCAAGGGT 542327
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| || || || | || || || || |||||||| |||
Sbjct 542328 GATCGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTG 542370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314728940248076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |