Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq112 141 2e-28 >seq112 Length=604763 Score = 141 bits (156), Expect = 2e-28 Identities = 186/255 (73%), Gaps = 2/255 (1%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || || | | ||| |||||||| | || || | || || ||| Sbjct 339722 ATCATCACCGACGCTGTCAACATCGAGCAGGAGTTCCTGACCGAGGCACTGCCTTG-CGC 339780 Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504 ||| | ||||||||| | || || ||| || |||||||| || || |||||||| | Sbjct 339781 TCTTCTGGGCATGAACTCGGACCTCATGAAGCAATACATCGAGTTTGTTGCCGACCGTCT 339840 Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564 | |||| |||||||| ||||||| | ||||| ||| |||||||| | || ||||| Sbjct 339841 TCTTGTGGCACTTGGCAACGAGAAGATTTACAAGTCTGCCAACCCCTTCGACTTCATGGA 339900 Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624 | ||| || ||| || ||||||||||||||||| |||||||| |||| || |||| Sbjct 339901 GAACATCTCCCTTGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGTGATTACCAGAA 339960 Query 230625 GCCTGGTGTGATGAA 230639 | ||||| | ||||| Sbjct 339961 GGCTGGTATCATGAA 339975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057814824368510