Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq24 156 5e-33
seq112 91.5 2e-13
>seq24
Length=306188
Score = 156 bits (172), Expect = 5e-33
Identities = 437/662 (66%), Gaps = 18/662 (3%)
Strand=Plus/Minus
Query 53981 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 54040
|| || || |||| || ||||| | | ||| || |||| | || || || |||||
Sbjct 133670 CCGGGGCACTCATTGGGGCACATGAGAGTCCAGTCGCCGTTCTTCTCGACACGCTTCATG 133611
Query 54041 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 54100
|| ||||| || ||||| || || | || | || | | | ||| || || ||
Sbjct 133610 AACAGATCGGGGATCCACAGGGCCAAGAACAAGTCACGAGCGCGGGCTTCTTCCTTGCCG 133551
Query 54101 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 54160
||||| ||||| | ||| | | || || | ||||| || || | ||| |||
Sbjct 133550 TGGTTCTTGCGCAGATCCAAGAATTCAAAAACGTCGGCGTGCCAGGGCTCAAGGTAAATG 133491
Query 54161 GTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 54220
| | | | || || || ||||| || ||||| || | ||||| ||| ||||| || |
Sbjct 133490 GCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAG 133431
Query 54221 ACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCA 54280
|| | | ||| ||||| | ||||||||| | || ||||| |||| || || ||
Sbjct 133430 ACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTGGTACCGGCAATGTAAGAGCCG 133371
Query 54281 CTGGCACGAATAT--TACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAATG 54338
||||||| || | | |||| |||| || || |||||||| || ||||| | |
Sbjct 133370 GTGGCACGGATTCGGTGCACGTTGA--GACCGATGCCTCCTGCCATCTTGGAGATCATGG 133313
Query 54339 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 54398
| || || | || || ||||| || || || || || ||| |||||| || || |
Sbjct 133312 CACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGTCTTCCTTCATGTCAACCAGGA 133253
Query 54399 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 54458
| ||| ||||| || | || || |||||||| || | ||| || |||||||| |
Sbjct 133252 AGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGAACAGGGTTGGTGAAGCGTGAG 133193
Query 54459 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTC---GATA-GCT-GA-GTCTATATCCC 54512
| ||| || || | || ||||| ||||| || | ||| || ||| | |||
Sbjct 133192 TGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGACACGCTCGATGTCGTCACCCC 133133
Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572
| |||| || || ||||||||||| | |||||||||||||| ||||| ||||||
Sbjct 133132 A--GATG----CCGACAGCGACACGCATGATCATGTGCTGAGGTCGCTCAACAATCTTGC 133079
Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 54630
| || ||||| | ||||||| || | ||| || || || || || | ||| |||
Sbjct 133078 CATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTGAAGCCGAAGTATTGGTAGTTGA 133019
Query 54631 AA 54632
||
Sbjct 133018 AA 133017
>seq112
Length=604763
Score = 91.5 bits (100), Expect = 2e-13
Identities = 147/211 (70%), Gaps = 3/211 (1%)
Strand=Plus/Minus
Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193
||| ||||| ||| ||| || ||||| || | | ||| | |||||||| || || |
Sbjct 339670 ACAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAA 339611
Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253
|| ||||| || |||||||| || ||||| || |||||||| || | ||| |||||
Sbjct 339610 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAA 339551
Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCT---GTCATG 24310
||| || || || || || || |||| || | | || || | | | ||| ||
Sbjct 339550 AATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 339491
Query 24311 TATCCACTTTTGAGCCCAATCGGCCTTCTTT 24341
|||||| |||||||||||||||||||
Sbjct 339490 GATCCACCGAATAGCCCAATCGGCCTTCTTT 339460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593716575630960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |