Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq160 156 5e-33 >seq160 Length=69848 Score = 156 bits (172), Expect = 5e-33 Identities = 507/786 (65%), Gaps = 61/786 (8%) Strand=Plus/Plus Query 145535 ATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGT 145594 |||| || | ||||| ||| | || | | |||||||| |||||||| | |||||| Sbjct 45968 ATTATACAGACATCTTCATCGCAATTGTCTTGTGGGGGTCGTAGCCCTTGATACCAAAGT 46027 Query 145595 CCTCCGCCCTGAAGTCATCTATGT--CCTCCACCCGC-CTCAGGATCCTGAGC-CTGGGA 145650 |||| | | |||| ||| ||||| | | | | |||| ||| |||| | Sbjct 46028 CCTCTAATTTCCATCCATCAATGCTACCTCCCTTCTCGCGCGAGATCTCGAGTTCTGGAA 46087 Query 145651 AAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGAC 145709 | ||| | ||||| | || ||||| | || || | || ||||||| |||||| || Sbjct 46088 ACTGGC--GAGGCTCACGTTCCAGCTGAATGTTGAGCGCGTCGACGTGGTCGAGGTACAC 46145 Query 145710 GTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGAC 145769 || ||||| |||| ||||||| | | | || ||| | | | || ||| || | Sbjct 46146 ATGGGCGTCTCCCATGACGTGGGTAAGGCTACCAGGCACTAAATCACAGACGTGCGCAAG 46205 Query 145770 CATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCC 145829 ||||| ||||| | | |||||||| || ||||||||||| || || |||||||| | Sbjct 46206 CATGTGAGTCAGTAACGCATAGCTGGCAATATTGAAGGGCACGCCGAGGCCCATGTCGCA 46265 Query 145830 CGAGCGCTGGTACAGCTGGC-----AGGAGAGC-----------------------TCCC 145861 || || ||||||||||||| ||| | | || | Sbjct 46266 GGACCGTTGGTACAGCTGGCAATGCAGGTGGCCCTGCGGCTTAGGCTCGTCCTCGGTCTC 46325 Query 145862 CGCC--------------------CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGG 145901 ||| || || |||||||| | | || || ||||| Sbjct 46326 TGCCTCGCGTTTTTGGCGCGGGTACGAGACATAGAACTGCGCGAACATATGACACGGCGG 46385 Query 145902 CAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-T 145960 ||| |||| | | ||||| || ||||||||||| || |||| ||| | | | || | Sbjct 46386 CAGCACCATCTTGCGGAGGTCGGCAGGGTTCCAGGCCGTAAGGATGAGACGGC-GATCGT 46444 Query 145961 CGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGT 146020 |||||| || | || || || || || |||||| ||||| || || || Sbjct 46445 GGGGGTTTGTCCGCAGCTTGTGGATGAGTTCGGCGATCTGGTCGACGCCTTGTCCTGTGT 46504 Query 146021 AATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGG 146080 | ||||| |||||||| |||||| |||| || ||||||| |||||| |||||||| || | Sbjct 46505 AGTCTGTATTGGAGTCGACGTACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAAACAG 46564 Query 146081 GCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACC 146140 | || ||||| ||| || | ||| || ||| | ||||||| || || || | Sbjct 46565 GACCAAGGTCGCCGACTTCGCGATGCGTTAGACCGAGGTTGTCGAGGAACTCACGAGAGC 46624 Query 146141 CGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCC 146198 |||| ||||||| ||||||| ||| | |||| ||| | || || ||| ||| || Sbjct 46625 CGTTTCCGTCCCAAATCTTGATGCCGGCATCGCTGAG-GGTC-TTTGAGGAAGTGTTACC 46682 Query 146199 CCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAG 146258 | |||||||||||| ||||| ||| ||| | | ||||| | ||||||||| || Sbjct 46683 CTCGATGAACCAGAGAAGCTCGACGATGACGGCTCGTGTAAAGACGCGCTTGGTGGTGAG 46742 Query 146259 CAGGGG 146264 ||||| Sbjct 46743 GAGGGG 46748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590071806475080