Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05] 677 sequences; 45,719,213 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq112 87.8 2e-12 >seq112 Length=604763 Score = 87.8 bits (96), Expect = 2e-12 Identities = 193/287 (67%), Gaps = 3/287 (1%) Strand=Plus/Minus Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 ||||| |||||||| || || || | |||||||| ||||||||||| || ||| Sbjct 339345 ATGTAGGTATCAATGAGCAATGAGTAGGTCTCAGAGTGGATGTTTTCCATCATGATTTGA 339286 Query 14534 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAA 14593 |||||||| || |||| ||| || | || ||||| | |||| || |||| Sbjct 339285 AAACCATAGAAGCATCGAGCCTCAGGGATCTGGACCTCGCCGCTGAATCGCTCAACCAAG 339226 Query 14594 TTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTAT 14653 |||||||| || || |||||| || ||||| || || | |||| |||||| | Sbjct 339225 TTTTCATTGACGATGCCATCAGAGGCGGCAAAGAAGGCAAGGATGTGAGAGATAAAGAAC 339166 Query 14654 TGCTCTTC--ATTGCTGA-GTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCA 14710 ||||| || | | || | || ||||| ||| | |||||| || ||||| | ||| Sbjct 339165 TGCTCGTCGGAAGTCAGACGATTGTTCCAGTCGTGTTGATCCTTGGACAGATCAATTTCC 339106 Query 14711 TCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATAT 14757 || | ||||| || || | || || || |||||| ||| || Sbjct 339105 TCGGCAGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATTTGCCAGAT 339059 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482341518150360