Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001306435.1_202015-10-05]
677 sequences; 45,719,213 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq24 158 2e-33
seq112 104 3e-17
>seq24
Length=306188
Score = 158 bits (174), Expect = 2e-33
Identities = 341/503 (68%), Gaps = 18/503 (4%)
Strand=Plus/Minus
Query 80050 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATG 80109
||||| || || | ||| ||||| | | | || ||||| ||||| || ||||| || | |
Sbjct 133511 TGCCAGGGCTCAAGGTAAATGGCGAAAGCACCGGGTCGCTTGTTGCCGCCCTGGTCGACG 133452
Query 80110 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 80169
|||| ||| ||||| || | || | | ||| ||||| | ||||||||| || || |||
Sbjct 133451 TATCGAGCAGTGTTGTTGAAGACACGGAGCATAGGAATGACACCATTGGAGGTGCCGTTG 133392
Query 80170 GTCCCGGAGATATAGCTTCCACTGGCACGAATAT--TACTAATTGATAGACCTATTCCCC 80227
|| |||| || || || ||||||| || | | |||| |||| || || |
Sbjct 133391 GTACCGGCAATGTAAGAGCCGGTGGCACGGATTCGGTGCACGTTGA--GACCGATGCCTC 133334
Query 80228 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTAT 80287
||||||| || ||||| | || || || | || || ||||| || || ||||| |
Sbjct 133333 CTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCGTCGATGCTGT 133274
Query 80288 CATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 80347
| || |||||| || || || ||| ||||| || | || || |||||||| |
Sbjct 133273 CTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGCTGAGGGGTACCCGCATTGA 133214
Query 80348 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA- 80406
| | ||| || |||||||| || ||| || |||| || ||||| ||||| |
Sbjct 133213 ACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTAGGTCTCCAGGA 133154
Query 80407 ---GCT-GAT-TCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461
||| ||| || | |||| |||| || || ||||||||||| | ||||||||
Sbjct 133153 CACGCTCGATGTCGTCACCCCA--GATG----CCGACAGCGACACGCATGATCATGTGCT 133100
Query 80462 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521
|||||| ||||| |||||| || || |||| | ||| ||| || | ||| || |
Sbjct 133099 GAGGTCGCTCAACAATCTTGCCATCGATCTTCAGGAGGTAGGATCGCTCTAGAGTCTTGA 133040
Query 80522 AACCAAAATAGTTGTA--TGAAA 80542
| || || || | ||| |||||
Sbjct 133039 AGCCGAAGTATTGGTAGTTGAAA 133017
>seq112
Length=604763
Score = 104 bits (114), Expect = 3e-17
Identities = 150/211 (71%), Gaps = 3/211 (1%)
Strand=Plus/Minus
Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018
||| ||||| ||| |||||| ||||| || | | ||| || |||||||| || || |
Sbjct 339670 ACAGGCGAAGTCGGTGTGCAGGCCCTCATCACGAGAAATGAGCTCGTTGGAGAATGTCAA 339611
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078
|| ||||| || |||||||| || ||||| || |||||||| || | ||| |||||
Sbjct 339610 GCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGACGCGAAAGCACCACTGAAGAA 339551
Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT---GTCATG 50135
|| || || || || || || ||||| || | || || || | | | ||| ||
Sbjct 339550 AATACCCTCAACGGCAGCGAAAGCAACCAGACGCTGGGCAAAAGATGAGTTCTTGTCCTG 339491
Query 50136 TATCCACTTTTGAGCCCAATCGGCCTTCTTT 50166
|||||| |||||||||||||||||||
Sbjct 339490 GATCCACCGAATAGCCCAATCGGCCTTCTTT 339460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718262721650280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |